Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g04868 ATGAAGAAGAATTGTGAACTTTGCAAACTTCCGGCTAGAACTTTCTGTGAGTCAGACCAGGCTAGCTTATGCTGGGACTGCGATTCTAAGGTCCACGGAGCCAATTTCTTGGTTGAGAGACACACAAGAACTCTCCTCTGTCACGCGTGTCAATCTCCAACGCCGTGGAAAGCTTCCGGTGCTAGACTCGGTAACGCGCTTTCGTTATGTGAAAGATGCGCCGGTGGAAGAAAAGTTGATGCCGTACAACaaaatgaagaaagtgaagGTGACAATGAGGATGAGGTTGAAACTGATTCTGATGAGGATTCCGACGAAgaggaggatgatgatgatgttgataatCAGGTTGTGCCTTGGTCTTCAACGGCGATGCCACCGCCAGCGTCGAGTTCTTCCAGTAGCGAAGAATCGGTTTGCAAGTGTAACGAGAACGATGAAGTTGTTTCGAAGTTAGTTACAGAAATTACCTTGAAACGACGTCGTTTGGATCATGATTTTCAgGTTTCGGATTCGAAAAACTGGAAAAATCAACGGAGAGAGGAGGTTGATTTGTTAAGGTGTGACGGAGAACCGTCGTCAAAGGCGGCGATACGGCGTTATTGTGACGGAGATGGAACGGAGCAATCTCAGCCGCACGATTGA 645 0.4465 MKKNCELCKLPARTFCESDQASLCWDCDSKVHGANFLVERHTRTLLCHACQSPTPWKASGARLGNALSLCERCAGGRKVDAVQQNEESEGDNEDEVETDSDEDSDEEEDDDDVDNQVVPWSSTAMPPPASSSSSSEESVCKCNENDEVVSKLVTEITLKRRRLDHDFQVSDSKNWKNQRREEVDLLRCDGEPSSKAAIRRYCDGDGTEQSQPHD 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g04868 214 Pfam B-box zinc finger 3 44 IPR000315 GO:0008270
Tsu02g04868 214 PANTHER - 3 184 - -
Tsu02g04868 214 MobiDBLite consensus disorder prediction 86 115 - -
Tsu02g04868 214 SMART bboxneu5 1 46 IPR000315 GO:0008270
Tsu02g04868 214 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 3 184 - -
Tsu02g04868 214 MobiDBLite consensus disorder prediction 116 139 - -
Tsu02g04868 214 CDD Bbox1_BBX-like 5 46 - -
Tsu02g04868 214 MobiDBLite consensus disorder prediction 81 140 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g04868 Tsu-Chr2 57825580 57827031 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g04868 1 129 C2C2-CO-like Transcription Factor Family AT4G27310 43.030 3.53e-37 127
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Tsu02g04868 zf-B_box 8.9e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g04868 - - mtr:MTR_2g089310 283.108
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g04868 02 57825580 57827031 Tsu02g04868 02 57825580 57827031 ECH