Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g04855 ATGGGCGATGGAGGTGTCGCATGCATGCCTTTGCAGTATATTATGGAGAAGTTATCAAGTTCAGAGAAAACGCATTGCGGAGGCAGTAACGGGAATGGCTTCAACTCCAAGTTGCTTAAGTTTTCTGATAGTGAAAGGAAGAATATGAAGTCGAGGAAGAGTGAATTAGGGTTGGATAGAGTGAGTAAGAGGAGTAGTGGTGATTTTGAGAATGGTGATAAGGTGCAGAAGGAAGAAGTGGAAGAAGGTGAATTGGTTACTACTACTAACTTGAAGTGGCCTAGaagtgaaattgaaattgaaaatgggGAGTTTGTGCCGGAGATGAATTCCATGCCGAGGCGAAGTGAGATTGAGAATGGGGAGATTTTGGGTGATAGATGGAAATCAAGGGAGTTTGAGAAGGGAGAGATTCATTCTGGGAAATGGAGAAGAGATGATGTGGAAAGAGGGGAGATAGTTCATGAGAAGGGTAGGAGAGGAGAAAATCAATATGGACCGTGGAGAGGTATGAATCATGATATTGAGAAGGGAGAATTTATTCCAGATAGATGGTATAAGGGACAAATGGGGAAGAATGATTATGGTAACAGCAGTAACCGAAGGCATTATCCGGGTAAGGACAAAGGGTGGAAATTTCAACGTGAACGGACTCCACCACCTTCTTGGAGATATACAGGTGAAGATTCTTTTAGGAATAAAGAGTTCATTAATAGAAGTGGGAATCAGCATGCAAAAAATTCTCCCAGGTGGGAGAATGCACCGCCGAGGAATGTAAGGATCAGTTCAAAGATTGTAGACGACGAGAAAAATGCTTATAGCAATGGTAAGGATCATACACGAGATTACACTTCTTCTGGAAGTCGCTTGAAGAGGCCCGGCAATGATTTTGACAACTATGAGCGGAAGCATTCTGCAGATTTTACAAGTTTAAAAAGTCGAAGGCTTTCTGATGATAGCTATCACTGTGGTTATTCAGAGAACTATTCCCGTCGCCCTGCGGAGCAGTCTTACAGAAATAATAATTCTACCAGACTATCTGCGGAAAAGTATTCTTCTAGAAATCATGAATCTTCTTTGTCTGCCAGACCAGCCTATGACAGGCATGAACGCAGTCCTGTTCATTCTGAGTGGTCCCCACGTGACCGAAGCAGGTATTATGATCATAGAGACCGCACTCCAGTACGTCGATCACCCTTTGGTCGTGAGAGATCTCCATATACCCGGGAGAAGTCCCCCCATAGCCGGGAGAGATCCCCCCATGGTCGGGAGAGGTCCCCATATATGAGGAGCTGGGACAGAAGTCGACAGCATGACCATAAGTTGAAAAGTCCAGCACGCACCGAGCAGTCACCCCAAGATCAACGTTGGCGACAGCATGATCATAAGTTGAAAAGTCCAGCACATACTGAGCAGTCACCCCGAGATCAAGGTTGGCGACAGCATGATCATAAGTTGAGAAGTCCAGCACGTACCGAGCAGTCACCCCAAGATCAAGGTTGGCGACATCACAATCATAAGTTGAGAAGTCCAGTACGCACCGAGCAGTCGCCACAAGATCAAGGTTGGTGTCATGATCACAGGGATTTGACTCCAGATTTAGTGGAACGACCCCCCCTTGATCGGACTAGGAAAGATGTTGATGAAGAAACAAGTTGCAAAACCTCATCAAGTGAAACACATAACTCGCCAAATAGTTGTAAGAGTGATGAAGATAAGCACATTCAAAGGGAGACAAATTGTTCAGTTACAGAATCTCAAGGTGAAAGAAACATTCAAAACACCAATGAGTCAATTGAGAAAGATATTAGTAGTAGTCAACCCGTTGACGTTGAGGAACAGCAGTCCAGTAGTCCAACTGTTAACCACAAAGAATCTCCCCACCGTGAGCCACAACCACCTCCTGATGAGCTGTTTTCAATGGAAGAAGATATGGACATTTGTGATACCCCTCCTCATGTCCCTGTGGTGACAGATTTGTCATCAGGGAAATGGTTTTACCTTGATTATGAAGGTGTAGAAAATGGGCCTGCTAAATTGTGTGACATCAAGGTCCTTGTTGATGAAGGGGTACTAATGTCAGATCATTTTATCAAGCACTTGGATAGTGACAGATGGTTAACAGTTGAAAATGCAGTGTCGCCATTGGTTGCTCAGAGCTTTCCTTCCATTGTGTCAGATACAATAACTCAGCTTGTAAATCCTCCAGAAGCTTCTGGTAATCTTTTGGCCGATACTGCATATATTCAATCTGGTCCTGAGAATCATCCGGAAATGCTGGCCCTCACGCCACGCATACACCCTAATGAAAGTGTGCTTACGTCTGAACGTTTGGACAACTTCTACATTGATGAAAGGGTTCGAAACCTGTTGGAGGGATATGATGTCATTCCTGGGATGGAACTTGAGGCAGTAAAAGAAGCTTTGcaaatgaaatttgaatatgTGGAAGAGGATGGATTAGGAGACTATGAAGGTTTTCCTTGGCATGTTTCCTGCCATAGGAAAGATTGTGATTCAAGTATTGATTTAGCAACAAGAGATTCTGAATCCCAGACAACTATATCTTTTGACAACAAGGATAATGGACTTGGCTTTGGTATTCCTAATGACTGGTTTTCCACTCGTTGGTCATGCAAAGGCGGTGACTGGAAGAGGAACGATGATGCCCAAGATAGATCTTCCAGGAAAAAAGTTGTTCTAAATAATGGTTTTCCATTGTGCCAAATGCCAAAGTCTGGATGTGAAGATCCTCGATGGCCTGAAAAAGATGACTTGTATTTTCCTTCTCAAAACAGGAGGCTTGATCTCCCTTTGTGGGCTGTTGGTGTTGATGAGTGGGTTGATTGCAATGCTGCAAGTAGGTCAGTTCAATGTAAGCCTCCTTTTGTCAAAGGAGTGAAAGGTAATGTTCTTTCAGTGGTAAGAATAAATGCATGCGTTGTCAATGACCAGGGATTGTTGCTATCTGAGTCACGCCACCAGATCCGAGGTAAGGATAGACAGCATCCAAGGTCAACTCGGCCATTCACTTCAACCAGCGATAGTAGGAGATCATCAACCGAAGAAGATTCTCAGTCAAAATCAGTTAGTGATCAAGGTTCTTACCAAAGCACGGAGTTCATCAGTGTCCCTAAAGACCATCTCTGTACTATCCAAGAGTTGCAACTACATTTGGGTGACTGGTATTACATTGATGGTTCTGGGCGTGAGAAAGGGCCTTCATCATTTTTAGAGCTACAATATTTAGTAGATCAAGGAATTATAAAAAAGCATAGCAGTGTGTTTAGGAAATGTGATAAACTCTGGGTTCCTATTGCCTCTGCCGCAGAAACTTCAGATGTCTGCCTCACGAGCCACCAAAAAAGCAGTTCAACTTTGGGTGAATGCTCTGATCATCCATCAACGCAAACTCAAGGTGTTTTCTATGGCGAATCTCACACTAGTTCAAGTTTGTTTAACATGATTCACCCTCAATTTGTTGGTTTTACTCGTGGGAGGCTACATGAACTGGTTATGAAATCATACAAGAGCCGGGAGTTGGCCGCTGCTATAAATGAGGTTTTAGATCCCTGGATCAATGCAAGACAACCAAAGAAAGATGTGGAGAAACAGATATATTGGAAATCAGAAGGCGACACACGAGCTGCCAAAAGAGCCCGGTTGCTGGTTGATGATAGTGAAGAAGACAGTGGCTTGGAAGATGATGTTACTATTATTGACAAGAATGAACCCACTTTTGAGGATTTATGTGGTGATGCTACTTTTCCTGAAGAAGAAACTGGTATGGCTGATTCTGAAGTTGGAAGCTGGGGCTTATTGGATGGTCCAGTTTTGGCACGGATTTTCCATTTTTTGAGATCTGACTTTAAGTCCCTTGTATTTGCATCAATGACCTGCAAGCATTGGAGTGCTGCTGTAAGGTTTTACAAGGAAGTTTCAATACAGGTCAATTTGTCGTCCTTAGGGCATTCTTGCACTGATACTGTGTTGTGGAACATTATGAATGCTTATGAGAAAGCCAAGATCAATTCTATAATTCTAATGGGTTGTAACAACATTACGGCTGACATGCTTGAGAAAATTCTTCTTTCATTTCCCGGTTTATGTACCATAGATATCAGAGGATGCAGCCAGTTTGGTGAGCTAACTCCTAAGTTTACCAATGTGAAATGGATCAAGAGCAGAAGTTCACGCAAGGATAGAATTGCAGATGAGCCTCATAAAATTAGAAGCCTTAAACATATTACAGAGCAAGCTTCATCTGCTTCCAAATCCACTAATTTAGGAATAGATGATTTTGGTCAGTTGAAGGAGTATTTTGATAGTGTGGATAAGAGAGACTCGGCAAAGCAATTATTTCGTCAAAACCTATACAAGCGGTCCAAACTTTTTGATGCTAGAAGGTCCTCTTCCATTCTATCTAGGGATGCTCGTACAAGACGTTGGGCAATAAAGAAGTCTGAAAGCGGCTTTAAGCGGATGGAGGAATTCCTTGCTTCAAGAGTAAAGGAAATCATGAAGACAAACTCTTGTGACTTCTTTGTGCCCAAGgTTGCAGAAATTGAGGCCAAAATGAAAAGTGGTTATTACAGTAGCCATGGATTGAGCTCTGTCAAAGAGGACATAAGTAGAATGTGCCGTGATGCAATGAAATTGAAAAATCGGAGTGATGCTAGTGACGTGAATCACCTTATCACATTATTTCTTCAACTGACAACACAGTTGGAAGCAAGTTCTAAGAATGTGCACGGCAGAGACGTCCTACTGAAGTCATTGGACAATGACTTGCCACCAATGTTAAGCTCTACTTCCTCAAAGTATAAGAAAAGTAGATTAGTGAATGAAAGGAAGTACAGGAGTAATGGAAAACATAATGTTTTGGATAATGTAGAGTATACCTCTGATAGAGAAATTAGGAGGCGCTTAACAAAGTTGAATAAGAAATCCATGGGCTCAGAGAGTGAAACATCTGATGATCTTGATAGGTCTTTTGAAGATGAAAAGAGTGACAGTGATACTACGACTGAGTCTGAAAGTGACCATGAAGTACGTTCACAAATTATGGTTAGGAAGCCAAGAGGGGATGTATGCTTCTCACCTGAGGAAGAGTTGGATTTTATAACTGATGACCGAGAGTGGGGTGCTCGCATGACGAAAGCAAGCCTGGTTCCTCCAGTTACCAGGAAATATGAAGTCATTGATCATTATTGCATTGTAGCTGATGAGGAGGAGGTGCAGAGGAAGATGCGGGTTTCATTACCAGATGATTATGCAGAGAAGCTGAGTGCGCAAAAGAATGGCACAGAGGAGTCAGATATGGAACTTCCCGAAGTCAAAAGTTTCAAACCTAGAAAGCAGCTTGGAAATGAGGTTATTGAGCAAGAAGTTTACGGAATTGATCCTTACACACACAACCTTTTGCTTGATTCTATGCCAGAGGAGCTAGATTGGTCTCTGCAGGAGAAGCATTTGTTTATAGAAGACATGCTCCTTCGAACATTGAATACGCATGTTAGGAGCTCTACTGGAACTGGAAATACTCCAATGAGCTACCCTTTGCAGCCTGTTATTGACGATATTAAAAGATGTGCTGAAGAAAGTTGCGATACAAGAATGATTAGAATGTGTCAAGGTATTCTGAAGGCCATAGACAGCCGCCCAGATGACAAATATGTAGCTTATAGAAAGGGGCTTGGTGTTGTTTGCAACAAGGAAGAAGGCTTCTCTCAAGAtgattttgttgtggagtttcTTGGAGAGGTTTATCCTGTATGGAAGTGGTTTGAGAAACAAGATGGGATTCGATCTCTGCAGAAAGATAGTACAGATCCAGCACCAGAATTCTACAACATCTACCTTGAGAGACCAAAGGGTGATGCTGATGGGTACGACTTAGTTGTCGTTGATGCCATGCACAAGGCTAATTATGCCAGTCGAATATGTCATTCTTGCCGACCCAATTGTGAAGCCAAAGTTACTGCTGTTGATGGTCAGTATCAAATTGGTATTTATAGTGTTCGTAAAATTCAACATGGTGAGGAGATCACTTTTGATTACAATTCTGTTACTGAGAGCAAGGAGGAGTATGAAGCATCGGTTTGTCTGTGTGGAAGCCAAGTATGCCGTGGGAGCTATCTGAATCTGACTGGTGAAGGGGCTTTTCAAAAGGTTCTGAAGGACTCGCATGGAATTCTTGATCGGCATTATTTGATGCTAGAAGCTTGTGAATCAAACTCCGTGTCTGAAGAGGACTATAATGACCTCGGAAGAGCTGGTTTAGGAAGTTGTTTGCTCGGGGGCTTGCCAGATTGGCTTGTTGCCTATGCAGCTCGCCTTGTGAGATTCATCAATTTTGAAAGAACTAAACTTCCCGAAGAAATTCTGAAGCATAATCTGGacgaaaagagaaaatatttttcAGATGTATGTCTTGAAGTTGAAAGAAGTGATGCTGAGGTTCAGGCGGAGGGAGTGTACAACCAAAGGCTTCAGAATCTTGCTGTCACTCTGGATAAGGTGAGGTATGTTATGAGATGTATTTTTGGCGATCCACGGAAAGCACCACCTCCTCTTGAGAAGCTCAGTCCTGAAGAAGTTGTTTCGTCTCTCTGGAAAGGAGAGGGCTCATCTGTTGAGGAACTTCTTCAGTGCATAGCTGCTTATGTAGAAGAAGGCATCTTGAATGATCTCAGATCCAAAATTCATGCTCATGATCCTTCAAGTTCGGCAGATATTCAAAAAGAGCTTCGGAAATCTCTATTATGGTTGAGGGATGAGATTCGAAGTCTTTCTTGTACATACAAATGCCGGCATGATGCTGCTGCTGACTTACTCCATATTTATGCTTATACCAAGTACTTCTTTAGAATACAGGAATATCAAACCATTACTTCACCGCCTGTGCATATTAGTCCACTTGATTTAGGCCCCAAGTATACTAACAAGTCGGGAGCAGAGATTCAGGAGTACCGAAAAGTATATGGTGAAAATTATTGTTTAGGGCAGCTGATTTTTTGGCATAATCAGAGTAATACAGATCCAGATCAGACCTTGGTTAAGGCAAGCAAGGGGTGCTTGTCTTTACCAGACATCGGTTCCTTTTATGCCAATGCTCAGAATCCATCACAGAATCGTGTTTATGGTCCAAGGACTGTCAGATCTATGCTGGAAAGAATGGAGAAGCAGTCGCAGAGATCTTGGCCCAAAGACCAGATATGGTTGTTTAGAAGTTCTCCGAAATTCTTTGGTAGCCCAATGTTAGATGCTGTAATAAATAACTCTACACTGGACAGGGAGATGATTCATTGGTTGAAGCATAGACCTGAAGCCGTGTGGGACCGTTAA 7347 0.4221 MGDGGVACMPLQYIMEKLSSSEKTHCGGSNGNGFNSKLLKFSDSERKNMKSRKSELGLDRVSKRSSGDFENGDKVQKEEVEEGELVTTTNLKWPRSEIEIENGEFVPEMNSMPRRSEIENGEILGDRWKSREFEKGEIHSGKWRRDDVERGEIVHEKGRRGENQYGPWRGMNHDIEKGEFIPDRWYKGQMGKNDYGNSSNRRHYPGKDKGWKFQRERTPPPSWRYTGEDSFRNKEFINRSGNQHAKNSPRWENAPPRNVRISSKIVDDEKNAYSNGKDHTRDYTSSGSRLKRPGNDFDNYERKHSADFTSLKSRRLSDDSYHCGYSENYSRRPAEQSYRNNNSTRLSAEKYSSRNHESSLSARPAYDRHERSPVHSEWSPRDRSRYYDHRDRTPVRRSPFGRERSPYTREKSPHSRERSPHGRERSPYMRSWDRSRQHDHKLKSPARTEQSPQDQRWRQHDHKLKSPAHTEQSPRDQGWRQHDHKLRSPARTEQSPQDQGWRHHNHKLRSPVRTEQSPQDQGWCHDHRDLTPDLVERPPLDRTRKDVDEETSCKTSSSETHNSPNSCKSDEDKHIQRETNCSVTESQGERNIQNTNESIEKDISSSQPVDVEEQQSSSPTVNHKESPHREPQPPPDELFSMEEDMDICDTPPHVPVVTDLSSGKWFYLDYEGVENGPAKLCDIKVLVDEGVLMSDHFIKHLDSDRWLTVENAVSPLVAQSFPSIVSDTITQLVNPPEASGNLLADTAYIQSGPENHPEMLALTPRIHPNESVLTSERLDNFYIDERVRNLLEGYDVIPGMELEAVKEALQMKFEYVEEDGLGDYEGFPWHVSCHRKDCDSSIDLATRDSESQTTISFDNKDNGLGFGIPNDWFSTRWSCKGGDWKRNDDAQDRSSRKKVVLNNGFPLCQMPKSGCEDPRWPEKDDLYFPSQNRRLDLPLWAVGVDEWVDCNAASRSVQCKPPFVKGVKGNVLSVVRINACVVNDQGLLLSESRHQIRGKDRQHPRSTRPFTSTSDSRRSSTEEDSQSKSVSDQGSYQSTEFISVPKDHLCTIQELQLHLGDWYYIDGSGREKGPSSFLELQYLVDQGIIKKHSSVFRKCDKLWVPIASAAETSDVCLTSHQKSSSTLGECSDHPSTQTQGVFYGESHTSSSLFNMIHPQFVGFTRGRLHELVMKSYKSRELAAAINEVLDPWINARQPKKDVEKQIYWKSEGDTRAAKRARLLVDDSEEDSGLEDDVTIIDKNEPTFEDLCGDATFPEEETGMADSEVGSWGLLDGPVLARIFHFLRSDFKSLVFASMTCKHWSAAVRFYKEVSIQVNLSSLGHSCTDTVLWNIMNAYEKAKINSIILMGCNNITADMLEKILLSFPGLCTIDIRGCSQFGELTPKFTNVKWIKSRSSRKDRIADEPHKIRSLKHITEQASSASKSTNLGIDDFGQLKEYFDSVDKRDSAKQLFRQNLYKRSKLFDARRSSSILSRDARTRRWAIKKSESGFKRMEEFLASRVKEIMKTNSCDFFVPKVAEIEAKMKSGYYSSHGLSSVKEDISRMCRDAMKLKNRSDASDVNHLITLFLQLTTQLEASSKNVHGRDVLLKSLDNDLPPMLSSTSSKYKKSRLVNERKYRSNGKHNVLDNVEYTSDREIRRRLTKLNKKSMGSESETSDDLDRSFEDEKSDSDTTTESESDHEVRSQIMVRKPRGDVCFSPEEELDFITDDREWGARMTKASLVPPVTRKYEVIDHYCIVADEEEVQRKMRVSLPDDYAEKLSAQKNGTEESDMELPEVKSFKPRKQLGNEVIEQEVYGIDPYTHNLLLDSMPEELDWSLQEKHLFIEDMLLRTLNTHVRSSTGTGNTPMSYPLQPVIDDIKRCAEESCDTRMIRMCQGILKAIDSRPDDKYVAYRKGLGVVCNKEEGFSQDDFVVEFLGEVYPVWKWFEKQDGIRSLQKDSTDPAPEFYNIYLERPKGDADGYDLVVVDAMHKANYASRICHSCRPNCEAKVTAVDGQYQIGIYSVRKIQHGEEITFDYNSVTESKEEYEASVCLCGSQVCRGSYLNLTGEGAFQKVLKDSHGILDRHYLMLEACESNSVSEEDYNDLGRAGLGSCLLGGLPDWLVAYAARLVRFINFERTKLPEEILKHNLDEKRKYFSDVCLEVERSDAEVQAEGVYNQRLQNLAVTLDKVRYVMRCIFGDPRKAPPPLEKLSPEEVVSSLWKGEGSSVEELLQCIAAYVEEGILNDLRSKIHAHDPSSSADIQKELRKSLLWLRDEIRSLSCTYKCRHDAAADLLHIYAYTKYFFRIQEYQTITSPPVHISPLDLGPKYTNKSGAEIQEYRKVYGENYCLGQLIFWHNQSNTDPDQTLVKASKGCLSLPDIGSFYANAQNPSQNRVYGPRTVRSMLERMEKQSQRSWPKDQIWLFRSSPKFFGSPMLDAVINNSTLDREMIHWLKHRPEAVWDR 2448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g04855 2448 MobiDBLite consensus disorder prediction 45 84 - -
Tsu02g04855 2448 SMART set_7 1887 2027 IPR001214 GO:0005515
Tsu02g04855 2448 MobiDBLite consensus disorder prediction 993 1036 - -
Tsu02g04855 2448 MobiDBLite consensus disorder prediction 1610 1630 - -
Tsu02g04855 2448 MobiDBLite consensus disorder prediction 317 640 - -
Tsu02g04855 2448 MobiDBLite consensus disorder prediction 188 301 - -
Tsu02g04855 2448 MobiDBLite consensus disorder prediction 330 360 - -
Tsu02g04855 2448 Pfam SET domain 1954 2021 IPR001214 GO:0005515
Tsu02g04855 2448 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE ATXR3 502 2447 - -
Tsu02g04855 2448 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE ATXR3 1 477 - -
Tsu02g04855 2448 MobiDBLite consensus disorder prediction 580 622 - -
Tsu02g04855 2448 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE ATXR3 502 2447 - -
Tsu02g04855 2448 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE ATXR3 1 477 - -
Tsu02g04855 2448 MobiDBLite consensus disorder prediction 154 173 - -
Tsu02g04855 2448 CDD SET_SETD2-like 1895 2043 - -
Tsu02g04855 2448 Gene3D SET domain 1858 2052 IPR046341 -
Tsu02g04855 2448 MobiDBLite consensus disorder prediction 1644 1689 - -
Tsu02g04855 2448 MobiDBLite consensus disorder prediction 262 286 - -
Tsu02g04855 2448 Pfam Protein SET DOMAIN GROUP 2 C-terminal 2032 2447 IPR045606 -
Tsu02g04855 2448 MobiDBLite consensus disorder prediction 520 555 - -
Tsu02g04855 2448 SUPERFAMILY F-box domain 1265 1308 IPR036047 GO:0005515
Tsu02g04855 2448 SUPERFAMILY SET domain 1896 2044 IPR046341 -
Tsu02g04855 2448 MobiDBLite consensus disorder prediction 565 579 - -
Tsu02g04855 2448 MobiDBLite consensus disorder prediction 1600 1630 - -
Tsu02g04855 2448 ProSiteProfiles SET domain profile. 1882 2021 IPR001214 GO:0005515
Tsu02g04855 2448 MobiDBLite consensus disorder prediction 361 513 - -
Tsu02g04855 2448 MobiDBLite consensus disorder prediction 201 215 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g04855 Tsu-Chr2 57668913 57681935 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Tsu02g04855 SET 1.9e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g04855 K22748 - gmx:100776205 3622.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g04855 02 57668913 57681935 Tsu02g04855 02 57668913 57681935 ECH