Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g04851 ATGAATttcaaaggaagaagaaaaatgacaaAACCTAGTTATCTGGTTGTTTATGTCATTATTCTTCTTTGTGCTTTAGCCAAAGGTGGTTCAGAGGGTAAGAGGTGGAAAAATGAAGACTTTTATAGATATTATCTTGGAATAAAGGAAGAGCAAGTGTGGAAACATTGTAGGAATGAAATGATAGAGAGGAATTATGATATCGAAGAATTTGACTTGCACTTATTGGATGAGATGGGCGAAAAGAGATCTAAATTTCTACCTCCCAATGTGAAACAAAACTTTCTAGATTGCATATTAAacagaaattttaaaattcctGTTTCGGGACAAGAGGGATATTTGCTGAAGAAGCATTATGAGTCGTTTTTTGGCTTATCAGATGGACATAGATATTTACTCTCAGAGTCACAACATAATCAGACACCACCACCAAGTCCTGATTCTGTTCCATCTGGATCATCACCGAAGCGAAAACATAATCAGACACCACCACCAAGTCCTGATTCTGTTCCATCTGGATCATCACCGAAGCGAAAAAGTCATGTTGCAGCACAAGTCAATTTGACACCTCCAGCTCCTGGACTTCCATACGATGATTTTCTGCTCACTCCGCCATTTGCACCACCACCTCCTCGTCGTGCTactttttatgatgacaaacaacGGAAATCAATTATTATTGCTGGAGTTGCATCAGGAATTATAATCTTAATAGGCTTGTTCTTATGCTGGCGCGAGGTGAAGAAGAGCAAAATACTTCAGAAAGATGACAGGCCTTTACTCCTATTAAGCTCTGGTGGTATTTCACAAAAGTCTACTGCTTTTGAAAATTCTGATAGGAGAGAACATGGTATTAACTATGGAATGAATCCTTCTACTGTTAGGAATTTGTCCTTTAAGCATGAAGTCAACAATGGTTCACTGAATGAGATAACATCATCAGATGACAAGGGACAAGTACTGGTGTCTCAATTAAAACATCCTCCAGGAAGATCAGCCCCTGAGTCTCCACCACCGCCGCCTACACCACCGCCACCACCGccacctccaccaccaccacctgcTCTTGCAACTCGGCCTCCACCTCCTCCAAAAATGTCTCGGGCTCCACCTGCTCCTCCCAAACCAATGGCAGGTAGAAACCAAAAATCACCTCTAGGACCACATCGTACTAGTGGGGGCAACGATGACTCCAATGCTTCAAAACCTAAATTAAAGCCATTTTTCTGGGACAAGGTTTCAGCAAATCCTGACCAAGCTATGGTCTGGCATGAGATTAGAGCCGGGTCATTCCAGTTCAGTGAAGAGAAGATAGAGTCTTTATTTGGCTGCACAAACCATAACagaaatgaaagaagaaaagatgCTCCTTCTTTAGAACCTTCAGTCCAGTACATTAAGATTCTTGAGCCCAAGAAAGCACAGAATTTATCGATTCTTTTACGTGCTCTGAATGTGAGCACAGAAGAAGTTACTGACGCCCTTAATGAAGGTAATGAGATTCCTGTTGAGCTCATCCAAACAGTATTGAAGATGTGGCCAACAATGGATGAGGAATCAAAACTAAAGTTATACACAGGCGACATTTCTCAACTTGGCCCTGCAGAGAGGTTTCTCAAGGCCTTGGTTGATATTCCACTAGCTTTCAAACGTCTTGAGTCTCTACTGTTCATGTTTACACTTCCAGAAGAGGCTTCAAGCATTAAGGAATGCTTTACAACATTAGAGGTTTCTTGCAACGAACTAAGAAAAAGCAGGCTCTTTCAAAAGCTATTAGAAGCAGTTCTAAAGACAGGAAACCGATTGAACGATGGAACCTATCGTGGTGGGGCTCAAGCTTTTAAGCTTGACACACTTTTGAAACTTGCAGATGTAAAAGGAACAGACGGCAAGACCACACTGTTACACTTTGTGGTTCAAGAGATCATACGTTCCGAGGGCATAAGAGCTGTAAGAACAGCGAAAGAAAGACAAAGCCTTTCTAGTATGAAAACCGAGGATTCCATTGATGATTCAAATAGGCAATCAGAAGATCACTATCGCAGCCTTGGACTTCAAGTAGTTTCAGGTCTAAGCACTGAACTAGAAGATGTGAAAAAGGCAGCAGTAATAGATGGTGATGCTCTAACAGCTGCAGTGTTGAAACTTGATCATAGATTGGGAAAAGCCGAAGAACTGTTGAATACTGATCTGAAGAATCTAGAAGAAGACAGCGAGTTTCAACATTCCCTTGCAGATTTTGTGGAGAATGCAGTAGAGGAAGTGAAATGGTTGACAGGGGAAGAGAAGAGGATAATGGCCGAGGTTAAGAACACTGCAGATTATTTTCATGGGAACGCAGGAAAAGATGAAGGGTTGCGTCTGTTTGTGATTGTACGTGATTTCTTGTTAATGTTGGACAAGGTGTGCAAAGAGGTTAAAGTATCAACCAAGACAGTAGCGATTAAGGATCCTTCTTCATGCAAGAAAGAGGCTTCTTCAATGCCATCCTCTCCGGATACGTCTCAACCATCACCTGATATGCACAGGAGGCTCTTTCCAGCCATAGCAGAGAGGAGAATACATGACTCTAGTTCCGACGACGACGATGACAATAATGAGAGATTACCAACGtag 2619 0.4028 MNFKGRRKMTKPSYLVVYVIILLCALAKGGSEGKRWKNEDFYRYYLGIKEEQVWKHCRNEMIERNYDIEEFDLHLLDEMGEKRSKFLPPNVKQNFLDCILNRNFKIPVSGQEGYLLKKHYESFFGLSDGHRYLLSESQHNQTPPPSPDSVPSGSSPKRKHNQTPPPSPDSVPSGSSPKRKSHVAAQVNLTPPAPGLPYDDFLLTPPFAPPPPRRATFYDDKQRKSIIIAGVASGIIILIGLFLCWREVKKSKILQKDDRPLLLLSSGGISQKSTAFENSDRREHGINYGMNPSTVRNLSFKHEVNNGSLNEITSSDDKGQVLVSQLKHPPGRSAPESPPPPPTPPPPPPPPPPPPALATRPPPPPKMSRAPPAPPKPMAGRNQKSPLGPHRTSGGNDDSNASKPKLKPFFWDKVSANPDQAMVWHEIRAGSFQFSEEKIESLFGCTNHNRNERRKDAPSLEPSVQYIKILEPKKAQNLSILLRALNVSTEEVTDALNEGNEIPVELIQTVLKMWPTMDEESKLKLYTGDISQLGPAERFLKALVDIPLAFKRLESLLFMFTLPEEASSIKECFTTLEVSCNELRKSRLFQKLLEAVLKTGNRLNDGTYRGGAQAFKLDTLLKLADVKGTDGKTTLLHFVVQEIIRSEGIRAVRTAKERQSLSSMKTEDSIDDSNRQSEDHYRSLGLQVVSGLSTELEDVKKAAVIDGDALTAAVLKLDHRLGKAEELLNTDLKNLEEDSEFQHSLADFVENAVEEVKWLTGEEKRIMAEVKNTADYFHGNAGKDEGLRLFVIVRDFLLMLDKVCKEVKVSTKTVAIKDPSSCKKEASSMPSSPDTSQPSPDMHRRLFPAIAERRIHDSSSDDDDDNNERLPT 872
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g04851 872 MobiDBLite consensus disorder prediction 818 872 - -
Tsu02g04851 872 Gene3D Formin, FH2 domain 402 828 IPR042201 -
Tsu02g04851 872 PANTHER FORMIN-RELATED 9 865 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Tsu02g04851 872 SUPERFAMILY Formin homology 2 domain (FH2 domain) 465 813 - -
Tsu02g04851 872 MobiDBLite consensus disorder prediction 136 182 - -
Tsu02g04851 872 MobiDBLite consensus disorder prediction 326 406 - -
Tsu02g04851 872 MobiDBLite consensus disorder prediction 386 400 - -
Tsu02g04851 872 SMART it6_source 396 818 IPR015425 -
Tsu02g04851 872 MobiDBLite consensus disorder prediction 332 379 - -
Tsu02g04851 872 MobiDBLite consensus disorder prediction 655 677 - -
Tsu02g04851 872 MobiDBLite consensus disorder prediction 824 839 - -
Tsu02g04851 872 MobiDBLite consensus disorder prediction 846 872 - -
Tsu02g04851 872 PANTHER FORMIN-LIKE PROTEIN 9 865 - -
Tsu02g04851 872 Pfam Formin Homology 2 Domain 399 800 IPR015425 -
Tsu02g04851 872 ProSiteProfiles Formin homology-2 (FH2) domain profile. 396 826 IPR015425 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g04851 Tsu-Chr2 57631424 57636597 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g04851 398 855 FH2 protein (formin) Gene Family AT5G54650 62.771 0.0 563
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g04851 - - lja:Lj3g3v2888350.1 833.558
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g04851 02 57631424 57636597 Tsu02g04851 02 57631424 57636597 ECH