Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g04844 ATGTCTTCCTCTAATCTCTTCGCAACTATTCTCATCTCAATAACCTTAGCTCTAATTGCGCAAACATCGTTTGCACTCAATGACCCTCTTTACCACATTTGTTCAAACTCCGAGAATTTCACAACCTATAGCCCATATGAATCAAACTTGAAATCACTTGTCAACTCGCTTATATATAAAACCCCTTCAACCGGTTTTGGCATTGGATCAGCGGGGGTCCAATACCAAAATCAACAAGTATATGGGCTTGCTCTTTGTCGTGGCGATGTATCAACCTCAGAGTGCAAAACTTGTGTCTCAAACGCAACCAAAGAAATTCAAAGTCGTTGCCCATACAATAAAGGCGCGATCATATGGTACGATAATTGCATGTTCAAGTACTTGGACAATGATTTCATTGGCAAAATTGATAATACAAACAAGTTCACTTTATTGAATGTACAAAGTGTTAATGATCCCATCAAATTCAACAACATGACTAAGGACTTATTGAGCTTACTTGCTAATGAAGCTTCTATGGATAAGAAATTTTATGCTAGTGGAGACTTGAAGATTGGAGAATCAGAGAGAGTTTATGGATTAACTCAATGCACTAGAGACCTTTCTAGTGCTGATTGTAAGAAGTGTCTTGATGATGCAATTAGTGAACTAATACCATATGGGAAAAAAGGAGGCAGAATTCTTAGTGGAAGTTGCAACATTCAATATGAAGTTTACTCATTTGTTAAGGAGTAA 735 0.3714 MSSSNLFATILISITLALIAQTSFALNDPLYHICSNSENFTTYSPYESNLKSLVNSLIYKTPSTGFGIGSAGVQYQNQQVYGLALCRGDVSTSECKTCVSNATKEIQSRCPYNKGAIIWYDNCMFKYLDNDFIGKIDNTNKFTLLNVQSVNDPIKFNNMTKDLLSLLANEASMDKKFYASGDLKIGESERVYGLTQCTRDLSSADCKKCLDDAISELIPYGKKGGRILSGSCNIQYEVYSFVKE 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g04844 244 ProSiteProfiles Gnk2-homologous domain profile. 28 132 IPR002902 -
Tsu02g04844 244 Gene3D - 138 241 IPR038408 -
Tsu02g04844 244 Gene3D - 27 132 IPR038408 -
Tsu02g04844 244 PANTHER CYSTEINE-RICH REPEAT SECRETORY PROTEIN 38-RELATED 13 243 - -
Tsu02g04844 244 PANTHER CYSTEINE-RICH REPEAT SECRETORY PROTEIN 38 13 243 - -
Tsu02g04844 244 Pfam Salt stress response/antifungal 34 127 IPR002902 -
Tsu02g04844 244 Pfam Salt stress response/antifungal 151 238 IPR002902 -
Tsu02g04844 244 ProSiteProfiles Gnk2-homologous domain profile. 138 241 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g04844 Tsu-Chr2 57598316 57599050 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g04844 1 243 Pollen Coat Proteome AT4G20670 34.749 1.75e-40 138
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g04844 - - gmx:100527155 346.665