Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g04843 ATGCAAACATCTTTCGGAACTGACCCACtatttcatttttgttcaaaCTCGGGGAATTTCACTGCTCAGAGTCCATATAAATCAAGCTTGAAAACACTCATCAACTCACTTATCTATGAGACACCTTCAACGGGTTTCGACAGTGAGTCAGTGGGCCTGGCACAATACCAAAACCAACAAGTATATGGATTAGCTCTTTGTCGTGGCGATGTATCAACCTTAGAGTGCAAAACTTGTGTCTCACAGGCAACCAAAGAAATCCAAAGACGCTGCCCATATAATAAAGGCGCGACCATATGGTACGACAATTGCATGTTCAAATACTTAAACACTGATTTCTTTGGTAAGATTGATAATACAAGCAAGTTCTCTTTATTAAATGTACAAAATGTGGATGATCCTATCAAATTCAACAACATGACTAAGGACTTATTGAGCATACTTGCCGATGAAGCTTCAATGCATCATAAATTTTATGCTAATGGAGAATTGAAGATTGGAGAATCAGAGAAAATTTATGGGTTAACTCAATGTACTAGAGACCTTTCTAGTGTTGATTGTAAGAAATGTCTTGATGATGCAATTAGTGAACTTCCAAATTGTTGTGATGGAAAGAAAGGTGGAAGAGTTGTTGGTGGAAGTTGTAACATTCGATATGAAGTTTACCCGTTTGTTAAGGTGTAA 684 0.3684 MQTSFGTDPLFHFCSNSGNFTAQSPYKSSLKTLINSLIYETPSTGFDSESVGLAQYQNQQVYGLALCRGDVSTLECKTCVSQATKEIQRRCPYNKGATIWYDNCMFKYLNTDFFGKIDNTSKFSLLNVQNVDDPIKFNNMTKDLLSILADEASMHHKFYANGELKIGESEKIYGLTQCTRDLSSVDCKKCLDDAISELPNCCDGKKGGRVVGGSCNIRYEVYPFVKV 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g04843 227 Pfam Salt stress response/antifungal 14 109 IPR002902 -
Tsu02g04843 227 Pfam Salt stress response/antifungal 131 221 IPR002902 -
Tsu02g04843 227 ProSiteProfiles Gnk2-homologous domain profile. 119 224 IPR002902 -
Tsu02g04843 227 PANTHER CYSTEINE-RICH REPEAT SECRETORY PROTEIN 38 5 226 - -
Tsu02g04843 227 Gene3D - 7 113 IPR038408 -
Tsu02g04843 227 Gene3D - 118 224 IPR038408 -
Tsu02g04843 227 PANTHER CYSTEINE-RICH REPEAT SECRETORY PROTEIN 38-RELATED 5 226 - -
Tsu02g04843 227 ProSiteProfiles Gnk2-homologous domain profile. 8 113 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g04843 Tsu-Chr2 57595816 57596499 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g04843 10 226 Pollen Coat Proteome AT4G20670 38.938 1.00e-46 154
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g04843 - - gmx:100527155 353.984