Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g04841 ATGTCTTCCTCAAATTTCTTCACAACTATTCTCATCTCACTAACCTTAGCACTAATTACTCGAACATGTTTTGGAGTCAAGGACCCTCTCTTCCACATTTGCTCAAACTCTAACAACTTCACAGCTAATAGCCCATAtgattcaaatttgaaaatactcatcaactCCCTTATCTACAAAACCCCTTCAACCGGTTTTGGCATTGGATCGGTGGGTCGGGTCCCAAACCAACAAGCATATGGGCTTGCTCTTTGTCGCGGCGACGTATCAACCTTAGAGTGCAAAACTTGTGTCTCTGAAGCAACCAAAGAAATCCAAAGTCGCTGCCCATACAATAAAGGCGCAATCATATGGTACGACAATTGCATGTTCAAATACTTAGACATCGATTTCTTTGGCAAAATTGATAATACAAACAAGTTCTCTTTACTGAATGTAAAAAGAGTTAGTGATCCTATCAAATTCAACAACATGACTAAGAACTTATTGAGCTTACTTGCTAATGAAGCTTCTATGGATAAGAAATTTTATGCTATTGGAAACTTGAAGATTGAAAAATCAGAAAGAGTTTATGGGCTAACTCAATGCACTAGAGACCTTTCTAGTGTTGTTTGTAAGAAATGTCTTGATGATGCAATTAGTGAACTTCCAAATTGTTGTGATGGGAAAAAAGGTGGCAGAGTTGTTAGTGGAAGTTGCAACATTCAATATGAAGTTTACCCATTTGTTAAGGAGTAA 738 0.3645 MSSSNFFTTILISLTLALITRTCFGVKDPLFHICSNSNNFTANSPYDSNLKILINSLIYKTPSTGFGIGSVGRVPNQQAYGLALCRGDVSTLECKTCVSEATKEIQSRCPYNKGAIIWYDNCMFKYLDIDFFGKIDNTNKFSLLNVKRVSDPIKFNNMTKNLLSLLANEASMDKKFYAIGNLKIEKSERVYGLTQCTRDLSSVVCKKCLDDAISELPNCCDGKKGGRVVSGSCNIQYEVYPFVKE 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g04841 245 ProSiteProfiles Gnk2-homologous domain profile. 137 242 IPR002902 -
Tsu02g04841 245 Pfam Salt stress response/antifungal 151 239 IPR002902 -
Tsu02g04841 245 Pfam Salt stress response/antifungal 34 126 IPR002902 -
Tsu02g04841 245 PANTHER CYSTEINE-RICH REPEAT SECRETORY PROTEIN 38 12 244 - -
Tsu02g04841 245 Gene3D - 137 242 IPR038408 -
Tsu02g04841 245 Gene3D - 27 131 IPR038408 -
Tsu02g04841 245 ProSiteProfiles Gnk2-homologous domain profile. 28 131 IPR002902 -
Tsu02g04841 245 PANTHER CYSTEINE-RICH REPEAT SECRETORY PROTEIN 38-RELATED 12 244 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g04841 Tsu-Chr2 57591791 57592528 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g04841 30 244 Pollen Coat Proteome AT4G20670 39.286 1.18e-46 154
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g04841 - - gmx:100527155 374.015
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g04841 02 57591791 57592528 Tsu02g04841 02 57591791 57592528 ECH