Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g04833 ATGGAACCAATTTGCTCTATTACATCGTCTTGTGCCACTCAAATCTCTGCACTTCTTTCTTCTCCCTCACCTCAACAAATTCAGGAATATTATCACAACATTTTCTCTTCAAAGCACTGCAATAGCATCACAGTTAAACAAGATGACAACTTTGGAAAAGGTCTCTATGCTGCAACGGACTTCAAAGAGGATGAACTTGTTCTGAAAGACCAAATGCTTGTTGGGTCTCAACACTCTTTCAAcaagATTGATTGTTTTGTCTGTAGCTTCTGCTTTCGCTTTATCGGTTCCGTAGAAATTCAAATTGGTAGGAGGCTTTACTTGACACAATTAAGGGCCAATGAGAGTCATGATTGTGATGTAGGAAGCTCTTCAAAGTCTTCGAAAAACTGTCATCAAATGGATTCATCTGATGAAGAGGAGAGCACTTGGCAATGCAGTTCTGGTAGTTCCAAAACTAAAGTTCCTCTCCCTGAAGGTGTTATCGAATCATTGATGAATGGCCAATTGAGATTGCCTTACTCTGAGAAGTTCTCCTTGCCTCCAGCTGTTCCGTGCCATGGTGGATGTGGAGAAGCTTACTACTGCAGCATGTCATGTGCAGAGGCTGATTGGGAATCCTCCCATTCTTTACTCTGTACTGGTGAGAGTTGTGATCCAAGACGTAGGGAGGCACTCCTTAAATTCGTGAAACACGCTAATGAAACAAATGATATATTCCTCCTTGCTGCAAAGGTCATTTCTTCTACCATATTAAGGTACCGCAAGTTAAAAGCAAATTGTCTTGCAGAGAAAGGGAAAAATGAGGCATCCTGTGTTTCAGACCAGTATAATTTCTCGCTTCTTTTGGAAGCTTGGAAGCCTATATCAATGGGATACAAAAAAAGGTGGTGGGACTGCATTGCATTACCAGATGATATTGATTCTTCCGATGAAGCGTCATTCAGGATGCAAATTAAAGAGTTGGCATTTGAATCTCTCCAACTTCTTCAGACAGCAATATTTGACAAGGAATGTGAGCCGTTATTCTCCCTTGAAATCTACGCACATATCATTGGCATGTTTGAGCTGAATAATCTTGATTTGGTTGTTGCTTCTCCCATGGAAGATTACTTTTTATACATCGATGAAATGACGAATCCTGATAAGGAAGAAGCTGAGAAAATTACACAACCAATTCTAGATGCTCTAGGTGAAGATTATTCTACTAGTTGCGAAGGAACTGCATTTTTTCCTTTGCAAAGCTGTATGAACCATTCATGTTGTCCTAATGCCAAAGCTTTCAAGAGAGACGAGGATAGAGATGGCCAAGCAACAATAATTGCATTGAGGCCTATCTGTAAGGGAGAAGAGATAACAATTTCATATGTTGATGAAGACCTTTCATTTGAGGAGAGACAAGCATCCCTTGCAGATTATGGTTTTAGGTGCAGGTGTCCAAAATGCATTGAAGAAGAGCCATAA 1464 0.4023 MEPICSITSSCATQISALLSSPSPQQIQEYYHNIFSSKHCNSITVKQDDNFGKGLYAATDFKEDELVLKDQMLVGSQHSFNKIDCFVCSFCFRFIGSVEIQIGRRLYLTQLRANESHDCDVGSSSKSSKNCHQMDSSDEEESTWQCSSGSSKTKVPLPEGVIESLMNGQLRLPYSEKFSLPPAVPCHGGCGEAYYCSMSCAEADWESSHSLLCTGESCDPRRREALLKFVKHANETNDIFLLAAKVISSTILRYRKLKANCLAEKGKNEASCVSDQYNFSLLLEAWKPISMGYKKRWWDCIALPDDIDSSDEASFRMQIKELAFESLQLLQTAIFDKECEPLFSLEIYAHIIGMFELNNLDLVVASPMEDYFLYIDEMTNPDKEEAEKITQPILDALGEDYSTSCEGTAFFPLQSCMNHSCCPNAKAFKRDEDRDGQATIIALRPICKGEEITISYVDEDLSFEERQASLADYGFRCRCPKCIEEEP 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g04833 487 CDD SET_SMYD 396 482 - -
Tsu02g04833 487 Pfam MYND finger 185 213 IPR002893 -
Tsu02g04833 487 SMART set_7 41 463 IPR001214 GO:0005515
Tsu02g04833 487 Pfam SET domain 52 456 IPR001214 GO:0005515
Tsu02g04833 487 SUPERFAMILY HIT/MYND zinc finger-like 188 214 - -
Tsu02g04833 487 ProSiteProfiles SET domain profile. 41 457 IPR001214 GO:0005515
Tsu02g04833 487 Gene3D SET domain 375 486 IPR046341 -
Tsu02g04833 487 SUPERFAMILY SET domain 41 480 IPR046341 -
Tsu02g04833 487 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE ATXR2 15 486 IPR044237 GO:0008168
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Tsu02g04833 SET 8.7e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g04833 - - gmx:100803651 813.527
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g04833 02 57539601 57544681 Tsu02g04833 02 57539601 57544681 ECH