Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g04795 ATGCTATTAAGCCAGTCAGTCAACCTTACCNCTTCCAATGACTCTTCTCCTTCACTTTCTGATCATGAAAATCGACCCATCATCAATGAACTTGACTTTTTCTCTACAAATAACCATGAAAACATTGCCTCTTCTTCCACTTCTGCACCCCCCTATCATCATATACATGATCATTACACCAATCCTTCAATCTTGGAATTGAAAGTAAACACTAGTTTGAATCTTCTTACCACCAACGCAAGCAATGATCAATCCATGGTGGAAGCTGATATACCAAGTAATTCAGAAGACAAAAGAGGTCAACTTGAGGCGGTTGTTCTTCAAGGTGAGCTTGAGAGATTGAAGGTAGAGAATCATCAACTGAGGAACATGCTCGAAGAGCGCGATCGGAATTACAGCACATTGCAGATGCATTTGATGAGTTTGATGCAAGAAAGGAAGGTAGAGGATAGTAATGAAGATAAAAAACAAGAGGTGAAACAAAATGGAAATGGTGGATTTTTGGTTCCAAGGCAATTTATGGATCTTGGATTGGCTACTAATAATTCTAATGTTGCTGCTGATGAACCAAGAAGTCAAGATAAGTCAAAAGCACTTGCAATCAACAATGAGGAAAGTTCCAAGGATGAATTACTTGTGCCTGATCATGATATGAAGGAATCTGATAAGGGAAATGAAAGAGACGATAGTCCTCCGAATCGAGTTTTAGCTGCTcctaataatagtaataatgttCCGAACTTTAGTCCTCAAACTAATGTTGAACAAGCTGAGGCCACTATGAGGAAAGCAAGAGTTTCGGTTCGATCTCGATCGGAGGCCGCTATGATCAATGATGGGTGTCAATGGAGAAAATATGGACAGAAAATGGCGAAAGGAAACCCGTGTCCTCGAGCTTATTATCGATGCACCATGGCTCATGGCTGTCCAGTGAGAAAACAGGTACAAAGATGTGCTGAAGATAGATCAATACTCATAACAACATATGAAGGAAATCACATTCATGCATTGCCACCGGCAGCAATGGAAATGGTACAAACAACATCAGCAGCAGCAAGAATGCTTTTATCAGGACCAATGACAAGTCCTGATGGCCTAATGAATCCAAATTTCCTCACAAGAGCAATCCTTCCTTATTCATCAAGCATAGCAACTATCTCAGCCTCAGCACCATTTCCAACCGTTACATTAGACTTAACCGAACCGCCAAATTCAAACCAGTTCCCTAACAATAAGAACACAAACCAATTCCAATTTCCGTTCGCTCAAAATTTTGCAAACTCATTACTACCTCAAATATTTGGTCAAACATTGCTTAACCAATCAACATTTTCAGGACTACAAATGTCTCAAGATGGAGAAAATTCTCAATTGGGTAATCAATCTCAGCAACAACTTGCTGACACAGTTACTGCTATTGCATCAGATCCTAACTTCACTACTGCTTTAGCAGCTGCTATTACTTCAATTATTGGAGCTGCACAACCAAACAATGGTAACAACAGTACTATTAATAATGGTAACAGTACTATAGCCAACAATAATAATGGCAATGTTACATCTAATAACAATGCCAATGGAAGCAATAAAGGCAACAATCCTAATTCATCAGGAAACTAG 1620 0.3895 MLLSQSVNLTXSNDSSPSLSDHENRPIINELDFFSTNNHENIASSSTSAPPYHHIHDHYTNPSILELKVNTSLNLLTTNASNDQSMVEADIPSNSEDKRGQLEAVVLQGELERLKVENHQLRNMLEERDRNYSTLQMHLMSLMQERKVEDSNEDKKQEVKQNGNGGFLVPRQFMDLGLATNNSNVAADEPRSQDKSKALAINNEESSKDELLVPDHDMKESDKGNERDDSPPNRVLAAPNNSNNVPNFSPQTNVEQAEATMRKARVSVRSRSEAAMINDGCQWRKYGQKMAKGNPCPRAYYRCTMAHGCPVRKQVQRCAEDRSILITTYEGNHIHALPPAAMEMVQTTSAAARMLLSGPMTSPDGLMNPNFLTRAILPYSSSIATISASAPFPTVTLDLTEPPNSNQFPNNKNTNQFQFPFAQNFANSLLPQIFGQTLLNQSTFSGLQMSQDGENSQLGNQSQQQLADTVTAIASDPNFTTALAAAITSIIGAAQPNNGNNSTINNGNSTIANNNNGNVTSNNNANGSNKGNNPNSSGN 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g04795 539 MobiDBLite consensus disorder prediction 235 250 - -
Tsu02g04795 539 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 20 518 IPR044810 GO:0003700
Tsu02g04795 539 MobiDBLite consensus disorder prediction 143 250 - -
Tsu02g04795 539 MobiDBLite consensus disorder prediction 1 23 - -
Tsu02g04795 539 Gene3D WRKY domain 262 339 IPR036576 GO:0003700|GO:0006355|GO:0043565
Tsu02g04795 539 MobiDBLite consensus disorder prediction 1 24 - -
Tsu02g04795 539 MobiDBLite consensus disorder prediction 493 539 - -
Tsu02g04795 539 SMART WRKY_cls 277 337 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tsu02g04795 539 PANTHER OS05G0567200 PROTEIN 20 518 - -
Tsu02g04795 539 MobiDBLite consensus disorder prediction 143 160 - -
Tsu02g04795 539 Pfam WRKY DNA -binding domain 278 335 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tsu02g04795 539 MobiDBLite consensus disorder prediction 201 230 - -
Tsu02g04795 539 Coils Coil 104 131 - -
Tsu02g04795 539 SUPERFAMILY WRKY DNA-binding domain 270 338 IPR036576 GO:0003700|GO:0006355|GO:0043565
Tsu02g04795 539 ProSiteProfiles WRKY domain profile. 272 338 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g04795 Tsu-Chr2 57149696 57153810 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g04795 14 499 WRKY Transcription Factor Family AT1G62300 46.260 1.25e-119 362
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Tsu02g04795 WRKY 1.3e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g04795 - - gmx:100127384 542.347
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g04795 02 57149696 57153810 Tsu02g04795 02 57149696 57153810 ECH
Tsu02g04795 02 57149696 57153810 Tsu08g03522 08 53270985 53273878 ECH
Tsu02g04795 02 57149696 57153810 Tsu04g04820 04 55288500 55291055 ECH