Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g04792 ATGTCACTCCCACCACCGATCCCACCACCGTCACTTTCAACTCCACCAAAGGTAAGGCCAACGGAGCTACCAATCCGGCAAATTCCAGGAACTCATGGATGGCCGTTACTAGGTCCCTTATCAGATAGGTTAGACTATTTCTGGTTCCAGAAACCAGAAAACTTCTTCAGAACAcgaaaagaaaaatacaaaagtaCAGTGTTCCGTACCAATATTCCTCCTACGTTTCCTTTCTTCACAAACGTTAATCCCAACATCATTGCTGTTCTTGATTGTAAATCTTTCTCTCACTTATTTGACATGGATCTTGTTGATAAAAAGGATATTCTGGTCGGAGATTTTGTTCCAAGTGTGCAATTCACTGGGAATATTAGAGTTGGTGTTTACCAAGATGTTTCTGAAGCTCAACATGCTAAGGCAAAGAATTTCTCCATGAACATATTGAAACAAAGCTCAAGCATATGGGTACAAGAACTTGTATCAAACCTCGACATATTTTTCGACCAAATTGAAGAAACATTGTCTCAATCTTCATCAGCAAGTTACTTTTCCCCGATGCAGCAGTTTCTGTTCACCTTCCTAAGCAAAGTCCTTGCCAGAGCTGATCCTTCCCTTGACCCCAAAATCGCGGAATCAGGCGCAACCATGCTCAATAAATGGCTCGCGGTTCAGCTTTTACCTACGATTAGTATCGGAACCATCCAACCACTCGAAGAAATCTTCCTTCATTCGTTTTCTTATCCCTATGCTCTTGTCAGTGGAGACTACAACAACCTCTACAACTTCATCAAACAACATGGTAAGGAAGTGATAAAAAGTGGAATTGAATTCGGGTTGAGTGAAGATGAAGCAATCCACAACTTGCTTTTCGTGTTAGGTTTCAACTCATATGGTgggttttcaattttccttcctAATTTGATAAACACAATAGCGAATGGCCCAGCTGGTTTGCAAGATCAGCTGAGGAAGGAAGCGAGAGAGAAAGGCGGTTCAACTCTTGGTTTCAGCTCGTTGAAAGAAATGGAACTAATTAATTCAGTGGTTTACGAAACCCTTCGGTTGAACCCACCGGTTCCGCTTCAATTTGGTCGAGCCAGAAAGGATTTTCAGTTAAGTACATATGACTCGGCGTTCAATGTGAAGAAGGGTGAGTTATTATGTGGGTTTCAAAAACTTGTAATGAGGGATCCAGTTGTGTTTGATGAACCAGAGCGATTTATACCCGACCGGTTCACTAAAGAGAAAGGGGCCGAGTTGTTGAACTATTTGTATTGGTCTAATGGACCACAAAGCGGTTCGCCAAGTGTGTCCAACAAGCAGTGTGCGGGTAAGGACATTGTGACCTACACCGCGGCCTTAATTGTGGCACACTTGCTTCGTAGGTATGATTTAATTAAAGGGGATAGCGGTTCCATCACAGCCTTACAGAAGGCCAAATGA 1443 0.4165 MSLPPPIPPPSLSTPPKVRPTELPIRQIPGTHGWPLLGPLSDRLDYFWFQKPENFFRTRKEKYKSTVFRTNIPPTFPFFTNVNPNIIAVLDCKSFSHLFDMDLVDKKDILVGDFVPSVQFTGNIRVGVYQDVSEAQHAKAKNFSMNILKQSSSIWVQELVSNLDIFFDQIEETLSQSSSASYFSPMQQFLFTFLSKVLARADPSLDPKIAESGATMLNKWLAVQLLPTISIGTIQPLEEIFLHSFSYPYALVSGDYNNLYNFIKQHGKEVIKSGIEFGLSEDEAIHNLLFVLGFNSYGGFSIFLPNLINTIANGPAGLQDQLRKEAREKGGSTLGFSSLKEMELINSVVYETLRLNPPVPLQFGRARKDFQLSTYDSAFNVKKGELLCGFQKLVMRDPVVFDEPERFIPDRFTKEKGAELLNYLYWSNGPQSGSPSVSNKQCAGKDIVTYTAALIVAHLLRRYDLIKGDSGSITALQKAK 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g04792 480 PANTHER INACTIVE LINOLENATE HYDROPEROXIDE LYASE-RELATED 18 476 - -
Tsu02g04792 480 PANTHER CYTOCHROME P450 26 18 476 - -
Tsu02g04792 480 Pfam Cytochrome P450 318 466 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g04792 480 SUPERFAMILY Cytochrome P450 24 468 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g04792 480 Gene3D Cytochrome P450 23 479 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g04792 480 PRINTS E-class P450 group IV signature 379 393 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g04792 480 PRINTS E-class P450 group IV signature 442 460 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g04792 480 PRINTS E-class P450 group IV signature 395 413 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g04792 480 PRINTS E-class P450 group IV signature 342 358 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g04792 Tsu-Chr2 57069378 57082258 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g04792 101 480 Cytochrome P450 AT4G15440 59.635 1.54e-168 478
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g04792 K10528 - gmx:100784395 733.406
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g04792 02 57069378 57082258 Tsu02g04792 02 57069378 57082258 ECH