Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g04778 ATGGATCCCTTGATCCGCAAGCTCCGGCGCTACCTTCTCCAATGGCTTCACCGATCTCGTTCCGGATCGGTGTTTTTTGTGAGGAGAATTTCGTATAAGGAAGTTAGAAAAGCAACAGATAGTTTTCAAAGAATTGTTTATAGTAATTCTGAAGTTTCTGCATATGCTGCGAATTTTGGTGATGGTGGTGTTTGTTTAGTGAAAGAAGTTAAAGAATTTGATAAAGGAAATGATGAGAATTTTCATAGACAAGTGCAATTGTTAGGACGTTTGCATCATCGCCACCTTCTTTCTCTCAAAGGCTTTTCTTTGGGACATAATCGCAAGAGCAAAAgACTACTCATATTTGACAACATAGAAAATGGAAGCTTAAAGGAACATCTCAATGACCCCTTGAAGACTCCCTTAAATTGGAGGACAAGGTTGCAGATTGCTAATGGTGTTGTGGCTGCACTGGAGTACTTGTTTCTTTTCAGTGATCCACCAATAAGTCATGTCTCTATCAGCTCTAGCAATATTATGTTAGATGAGAACTTCACCCCAAAACTATCCGATTTTGGCCTTCTTACTGGTGGAAGTTCTGTCTTGATACCACCATACTCCCAAGATAGCATGGGACAGGAAAGTTGCAAGATTATATTCCAACTTGGAGTTCTCATACTGGAACTAGTCACCGGTCAGTCTTCAGAGATGGAAGGTTCTGATTTAATTGAATGGATTCAAGAATCCCGATTTTTCAGTTCGATAGATAAGATGTTAGACCCTGATCTTGGAAACGATTATGACTGTACGGAGCTTAAAAGTCTTCTAGCTGTGGCAAAATTATGTATCAAATCATGGGACAAGCCTTCATATACAATTCCTCAGTTATTTCGGTATCTCCAAAAGGAGACTGATATTCCCTAA 906 0.394 MDPLIRKLRRYLLQWLHRSRSGSVFFVRRISYKEVRKATDSFQRIVYSNSEVSAYAANFGDGGVCLVKEVKEFDKGNDENFHRQVQLLGRLHHRHLLSLKGFSLGHNRKSKRLLIFDNIENGSLKEHLNDPLKTPLNWRTRLQIANGVVAALEYLFLFSDPPISHVSISSSNIMLDENFTPKLSDFGLLTGGSSVLIPPYSQDSMGQESCKIIFQLGVLILELVTGQSSEMEGSDLIEWIQESRFFSSIDKMLDPDLGNDYDCTELKSLLAVAKLCIKSWDKPSYTIPQLFRYLQKETDIP 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g04778 301 Gene3D Transferase(Phosphotransferase) domain 1 212 301 - -
Tsu02g04778 301 PANTHER OS01G0253100 PROTEIN 1 298 IPR045271 GO:0004714|GO:0006468
Tsu02g04778 301 Pfam Protein tyrosine and serine/threonine kinase 65 189 IPR001245 GO:0004672|GO:0006468
Tsu02g04778 301 Gene3D Transferase(Phosphotransferase) domain 1 119 210 - -
Tsu02g04778 301 Gene3D Phosphorylase Kinase; domain 1 17 117 - -
Tsu02g04778 301 SUPERFAMILY Protein kinase-like (PK-like) 23 254 IPR011009 -
Tsu02g04778 301 ProSiteProfiles Protein kinase domain profile. 10 301 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g04778 301 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 1 298 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g04778 Tsu-Chr2 56937937 56940820 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g04778 22 299 Receptor kinase-like Gene Family AT3G19300 36.789 1.96e-57 194
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_URK-1 Tsu02g04778 PK_Tyr_Ser-Thr 9.7e-15 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g04778 - - aprc:113853565 473.011
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g04778 02 56937937 56940820 Tsu02g04778 02 56937937 56940820 ECH