Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g04768 ATGAAATCTGCATTGCATGTGTTATTGCAAACATGCCCTTTAGGTAGAAATAGGTTGAAGATTGTGGAAGCTGGAGCTGTAAAAGAAATCATTGATCTTGCActtgaaaaacaagaaaaaaaccaAACAGAACTTATATTTATGGTTCTTGCTGATTTATGTTGTTGTGCTGATGGAAGAGAACAATTTGTGCAACATGCAGCAGGAATTGCAATGATTTCTAAAAGAACATTAAGGGTTTCATCGACAACCGATGATTGTGCtcttcaaatattttgtttgatttgtaaatATTGTGCTACAAATGATGTTGTTCAAGAAATGTTAAGAGTTGGTGGTGTTTCAAAACTTTGTATGGTTATGCAAGCTGATTGTGGTTCTTATTTGAAGGAAAAAGCTAGAGGTGTTCTTAGGTTACATTCTAATGTATGGAATAATTCTCCTTGTATTCAAGTTTATTTGTTAACTAGACATCAAAGGTTTGGTGAGTGA 492 0.313 MKSALHVLLQTCPLGRNRLKIVEAGAVKEIIDLALEKQEKNQTELIFMVLADLCCCADGREQFVQHAAGIAMISKRTLRVSSTTDDCALQIFCLICKYCATNDVVQEMLRVGGVSKLCMVMQADCGSYLKEKARGVLRLHSNVWNNSPCIQVYLLTRHQRFGE 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g04768 163 PANTHER WDSAM1 PROTEIN 2 158 IPR045185 GO:0061630
Tsu02g04768 163 SUPERFAMILY ARM repeat 3 137 IPR016024 -
Tsu02g04768 163 PANTHER RING-TYPE E3 UBIQUITIN TRANSFERASE 2 158 - -
Tsu02g04768 163 Gene3D - 1 146 IPR011989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g04768 Tsu-Chr2 56838763 56839254 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g04768 2 150 U-box Gene Family AT3G52450 44.737 1.47e-43 147
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g04768 - - gmx:100778547 256.914
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g04768 02 56838763 56839254 Tsu06g01283 06 12084029 12085219 PCT