Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g04766 ATGGGTTTTTTGTTGAAAGAAGTTTTGAAGACTTTGTGTGGTAGGAATCAATGGTCTTATGCTGTGTTTTGGAAGATTGGTTGCAACAATTCTAAGCTATTAATATGGGAAGAATGCTATCATGAGCCCTTGTCATGTCCTTCCCCTAATGGCATTGTTAGGATGTCAAATTTGCCTAATCCGAACGGGGAAGGATGCTGGTTTTCTTCTGAGTCTCAATCGTCTCATCTAGGAATACAAGAGGAGGATAGAGTCTCTTCTTTGATTAACAAAATGACAGTCAATAATTTAGTCATTGTTGCAGGTGAAGGTATAATTGGACGTGCTGCATTTACCAACAGTCATGAATGGATTCTCTTGAACAATTTTGCTAAAGGTGCATATCCACCTGAGGTATATGCTGAAATGCATCAGCAATTTTCAGCTGGAATGCAGACAGTAGCAGTAATTCCTGTGCTTCCTCACGGGGTTATTCAACTTGGTTCTTTCTTTCCGATAATGGAGAATATGGGATTTGTGCATGAAGTAAAGAGCCTGATCTTGCAACTAGGGTGTATTCCTAATGCCCTTCTATCCGAGGACTATTCAGCTAAACTTTCAAGTGAAAGACTTGATGGACGTGCTACTTCCGACGTACCCGTGTCTGTTGATACATCAGTCATTACCTCAAATTCCACTCCTTCAGCCGTTAATGGCTCCAATCAGCAAAGTTATTCATTTCATGCGTCAAAGCCTATTGTTCAAAGACAGGGTAGAGTTGTGGAGGCTAAAGTAATACCCtcaaattttgattcaaatctGCAAAAGCATTCTGTTTCATATAACGGGAGATCTGAATTCAATAACATAGCTGGTTCTGAGCCGTTTGGTCTATCAGGTCCAAATGATTATAGCCTAAAATATATGGAACAACAAATCTTATCATCAGTTGGGAGTCGAGATAATGTTAATCCTTGTATTAATGTGTCAAGTTCCTTAAACATCTCTCAACTAAAAACAGACGGAAGCCATGACATTGACCGTGGCAGTACATCATTACTTAGAGGAATCCCAGTACACGGTGGGATGAATAGTCTATTGAGAAGAAATCTGATTACTAGTTCAAATTTGACTGGTCGATCAGGTGTCATTCACATGCCTCTAGAATGTTCTGATCAGAAGATTCTTCCCGAAGTTTCAAACTTTGCTTCAAGAGGTCAAAAGATAGACTATGACATGCTTGAGGCCTCTAACTTCTCTTTTAATCCGGAGGAGAATGTGCCTATTAGTGGTCATATCCCTGGTTTTGTCGATGATTGCTTTCAGAAAGATGGTACTAATCAATCTATGATGACAACAAATCCTAAACACGACGAAACTTGCGCTCAACAATCTACATCAGGTGGTGACGACCTGTTTGATATTTTAGGTGTggatttaaaaaacaaacttctCAAAGGACACTGGAATGAATTGTTTGCTGATGAATCAGATGCCACTGCTGAAAATATGGTTAAAAAGGAAATATGTACGAACAAAGAGGGTACAAATTCTGATTATTATTCAGTTAATGAATCAATGTTAGACAGTGGCATTTTTTCTAGCATGTCAACAGATGACCACCTCTTGGATGCTGTGGTCTCAAAGGCCAAACGTCCTTTGATACATAATTCCGATGACATGTCTTGCAAGACAACATTGACCGGGAATAGTAGTATCACCTCTATTCCCTCTCGTGTTCGCAAGCAAGTTATGTCCGGTAATTTTGAAGGgggtttgtttggtttttcGAAGAATGAAGGTAAAACGGGTGCCTTAGAAACTAGTTCTCTAAGGTCTGGTTGTAGCAAGGACGATACTGGAAACCTCTCTCAAACAACTACTATATGTGGTTCTCAACTTAGTTCATGGTTGGAGAATGGTGGCAATATGAAGCATGAAAAGCGTGAAAATAGTGTTTCAACTGGATACTCTAAGCGCCCAGATGAAGTTTGCAAACCTAATCGGAAAAGGCTTAAACCAGGAGAGAATCCTAGGCCTAGACCTAAAGATCGTCAAATGATTCAAGATCGTGTCAAAGAGTTACGAGAGATTGTTCCAAATGGAGCGAAGTGTAGCATAGACGCATTGTTGGAACGGACCATTAAGCATATGGGTTTCTTGCAAAGTGTGACAAAGCACGCCGACAAGCTGAAACAGACCGGAGATTCTAAGATTGTTAGTAACGAAGGTGGGCTGGTTTTGAAAGACAACTTTGTGGGAGGGGCTACATGGGCATATGAGGTTGGCTCCCAATCAATGGTTTGTCCGATTATAGTCGAAGATTTGAATCCTCCTCGTCAGATGCTAGTCGAGATGCTTTGTGAGGAACGGGGTTTCTTTCTAGAAATAGCTGACTTAATCAGAGGATTAGGCTTAACAATCTTGAAGGGGGTAATGGAAGCTCGCAACGACAAAATCTGGGCACGTTTCGTTGTTGAGGCAAATAGGGACGTAACGAGAATGGAAATATTTATGTCACTCGTTCGTCTTCTAGAGCAAACAATGAAGGGTAACACGTCTTCATCCAATGCAATTGATGACATGATGGGTTACAACACTTTACCACAGAAGGCCTAA 2598 0.3995 MGFLLKEVLKTLCGRNQWSYAVFWKIGCNNSKLLIWEECYHEPLSCPSPNGIVRMSNLPNPNGEGCWFSSESQSSHLGIQEEDRVSSLINKMTVNNLVIVAGEGIIGRAAFTNSHEWILLNNFAKGAYPPEVYAEMHQQFSAGMQTVAVIPVLPHGVIQLGSFFPIMENMGFVHEVKSLILQLGCIPNALLSEDYSAKLSSERLDGRATSDVPVSVDTSVITSNSTPSAVNGSNQQSYSFHASKPIVQRQGRVVEAKVIPSNFDSNLQKHSVSYNGRSEFNNIAGSEPFGLSGPNDYSLKYMEQQILSSVGSRDNVNPCINVSSSLNISQLKTDGSHDIDRGSTSLLRGIPVHGGMNSLLRRNLITSSNLTGRSGVIHMPLECSDQKILPEVSNFASRGQKIDYDMLEASNFSFNPEENVPISGHIPGFVDDCFQKDGTNQSMMTTNPKHDETCAQQSTSGGDDLFDILGVDLKNKLLKGHWNELFADESDATAENMVKKEICTNKEGTNSDYYSVNESMLDSGIFSSMSTDDHLLDAVVSKAKRPLIHNSDDMSCKTTLTGNSSITSIPSRVRKQVMSGNFEGGLFGFSKNEGKTGALETSSLRSGCSKDDTGNLSQTTTICGSQLSSWLENGGNMKHEKRENSVSTGYSKRPDEVCKPNRKRLKPGENPRPRPKDRQMIQDRVKELREIVPNGAKCSIDALLERTIKHMGFLQSVTKHADKLKQTGDSKIVSNEGGLVLKDNFVGGATWAYEVGSQSMVCPIIVEDLNPPRQMLVEMLCEERGFFLEIADLIRGLGLTILKGVMEARNDKIWARFVVEANRDVTRMEIFMSLVRLLEQTMKGNTSSSNAIDDMMGYNTLPQKA 865
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g04766 865 MobiDBLite consensus disorder prediction 633 680 - -
Tsu02g04766 865 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 5 179 IPR025610 -
Tsu02g04766 865 CDD bHLH_AtLHW_like 669 738 - -
Tsu02g04766 865 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 665 714 IPR011598 GO:0046983
Tsu02g04766 865 MobiDBLite consensus disorder prediction 635 680 - -
Tsu02g04766 865 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 247 368 IPR043561 GO:0003700|GO:0006355
Tsu02g04766 865 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 369 865 IPR043561 GO:0003700|GO:0006355
Tsu02g04766 865 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 1 245 IPR043561 GO:0003700|GO:0006355
Tsu02g04766 865 PANTHER BHLH TRANSCRIPTION FACTOR-LIKE PROTEIN 247 368 - -
Tsu02g04766 865 PANTHER BHLH TRANSCRIPTION FACTOR-LIKE PROTEIN 369 865 - -
Tsu02g04766 865 PANTHER BHLH TRANSCRIPTION FACTOR-LIKE PROTEIN 1 245 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g04766 Tsu-Chr2 56793207 56799857 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g04766 452 862 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G27230 51.196 1.29e-113 359
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g04766 - - cam:101492357 1193.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g04766 02 56793207 56799857 Tsu02g04766 02 56793207 56799857 ECH
Tsu02g04766 02 56793207 56799857 Tsu06g01288 06 12173797 12180202 PCT