Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g04762 ATGGAAGTTATGTTGATAGAACAAGTTTCaaaattgatacttttttgTTCAATGATTACAATATGTTATAGTGCTACAAACCCTAATGATCTCaaagttttgaatgattttaGAAAAGGGTTAGAAAATCCTGAGCTTTTGAAATGGCCCGAAAAAGGTAACAATGATCCATGTGGTTCTCCTTCATGGCCTTATGTGTTTTGTTCTGATGATAGAGTCACTCAGATTCAAGCTAAGAATCTTGGTCTTAGAGGAAAATTGCCACAAAACTTTAACCAACTCTCAGAACTTTCCAATTTAGGTCTTCAACGAAACAATCTTACCGGTATGTTACCTAGTTTTAGTGGTTTATCGAAATTGGAATTCGCTTTCTTGGATTACAATTCATTTGATGCTATTccttttgatttcttcaatggATTAACAAGCCTTAGGATTTTGTCTTTGGAAGAAAATCAGCTCAATGTTAGTACTAATGGTTGGTCATTTCCTTCGGATTTGGAGAAATCGGCACAGTTAACCGATCTTTCCTTTGTTCATTGTAATTTGGTTGGATCTTTGCCTGATTTTCTAGGCACATTGCCATCTCTCACAAGTCTAAGGCTTTCAAATAACAAACTTTCCGGTAGGATTCCGGCTACTTTTGCTCAATCTTCAATTCAGGTTCTGTGGTTGAATAATCAAGAAGGAGGTGGTTTTACAGGTTCTATCGATGTTATTTCGTCGATGGTTTTCTTAACAACAATTTGGCTACATGGAAACAAGTTTTCAGGTACAATTCCAAACAATATTGGAAATCTCACTTCTTTGAAGGAATTCAATATCAATAGTAATCAAATTGTTGGGTTGATTCCACAATCCTTAGCAGAAATGAACCTTGATTCGCTTGTTTTGAACAATAACATGCTAATGGGTCCGATACCGAAGTTTAAATCCGCAAACTTTTCTTATGATGATAATCTCTTTTGTCAAACTGAGCCAGGACTTGAATGTTCCTCAGAAGTTACAGCACTGCTTGATTTTCTGAACAATCTGAATTATCCGTCATTTCTGATTTCTGATTGGTCAGGTAATAAACCATGTACAAGTAGCACAGGACCATGGTTTGGATTAAGCTGCAATAATTCAAACTCTGGTGTATCTATAATTAATCTACCAAAACATAAGCTTAATGGTAGTTTAAGTCCTTCACTTTCTAAGTTAGATTCACTTCTTGAAATTAGGCTTGCTGGAAATAATATAACCGGCACAGTTCCTAGCGATTTTACTAAATTGAAATCGTTGAGGTTGTTGGATTTAACTGATAATAATATTGACTCTCCTTTGCCAAATTTTCATGATGGTGTGAAAGTTATTACTGTGGGTAACCCCTTTCTAATTAATAACCAAACTGGAGGGAGTGTTAGTCCTACTATTAGTGGCCCGAGTTCAGAAAAAAACCCTTCACATTCTCCGTCTTCAGTGAAGCAGCCGGTTCCGAGCTCAAATCATAAGAGATTCAAGACAGTGGCAACAGTGGCTGGAGTTGCAGGGTTTGCAGTTGTAGCTTTTTTGGTTGTTTTATGTTTCTTTAAGAACAAGAAAGCATTGTCAGATGCTCCAAGTTCCATTGTGGTTCACCCTCGAGATCCGTCTGATCGAGGCAGTGTAGTTAAAATTGCGGTTTCAAGCAAAAACACTGGAAGCTTATCAGGAAAAACTGGCACAAGTTCACTGAGTAGCTTAAGTGGTGAAACTCAAAACTCTTACTTTATTGAGGCTGGTAAGAATGTCATATCTGTGCAAGTGCTACGCAAAGTTACTAACGATTTTTCATCGGAAAATGAGCTAGGCCGCGGTGGATTTGGGACTGTTTACAAAGGGGAATTAGAAGATGGAACCAATATAGCAGTAAAGAGAATGGAGAATGGAGTTATTGGCAATAAGGCATTGGATGAGTTTCAATCAGAAATAGATGTTCTTTCTAAGGTTCGTCACCGACATTTGGTATCTCTTTTAGGGTATTCCATTGAAGGCAATGAGAGACTTTTAGTTTATGAATATATGCCACTTGGTGCTCTAAGTCAACATCTTTTTCATTGGAGAAAATTCGAGTTGAAGCCTTTATCTTGGGCACAAAGACTTGTAATAGCACTAGACGTTGCTAGAGCGATGGAATATCTTCATGGTCTTGCTCGCGAGACCTTTATTCACAGAGATCTCAAGTCTTCTAATATTCTACTAGGCAATGATTTTCGTGCAAAAGTTTCGGATTTTGGTCTTGTGAAGCTTGCCCCAAATGGCGAAAAATCTATAGTAACCAAACTTGCCGGGACATTTGGTTACCTTGCCCCTGAATATGCTGTGATGGGGAAAATCACCACAAAAGTTGATGTGTTCAGCTATGGCGTGGTATTAATGGAACTTCTAACCGGACTAACGGCGCTTGACGAGAGCCGGTCAGAGGAAATCCGATACTTGGCCGAATGGTTTTGGcgaattaaatcaaacaaagaaaagCTTATGTCTGCAATTGATCCAACTTTGGAACCAAATGAAGAAACATATGAAAGTATAACTATTGTAGCAGAACTTGCTGGACATTGCACTGCTAGGGAAGCATACCATAGACCAGATATGAGTCATGCTGTCAATGTACTAGGAGCATTAGTGGAGAAATGGCGACCTGTTAACGATGAACTCGATTGCTATTCTTCAATTGACGACAGTCGGCCACTTCCTCAATTGTTGAAAATTTGGAAGGATGCAGAAAGCAATGAGTTTAGCTATAGTACTACTACTAGTCTTGAAGACAGTAAAGGAAGTATTGCATTGAGGCCTGCTGGATTTGCTGAATCTTTCACTTCTGTTGATGGTAGATGA 2862 0.376 MEVMLIEQVSKLILFCSMITICYSATNPNDLKVLNDFRKGLENPELLKWPEKGNNDPCGSPSWPYVFCSDDRVTQIQAKNLGLRGKLPQNFNQLSELSNLGLQRNNLTGMLPSFSGLSKLEFAFLDYNSFDAIPFDFFNGLTSLRILSLEENQLNVSTNGWSFPSDLEKSAQLTDLSFVHCNLVGSLPDFLGTLPSLTSLRLSNNKLSGRIPATFAQSSIQVLWLNNQEGGGFTGSIDVISSMVFLTTIWLHGNKFSGTIPNNIGNLTSLKEFNINSNQIVGLIPQSLAEMNLDSLVLNNNMLMGPIPKFKSANFSYDDNLFCQTEPGLECSSEVTALLDFLNNLNYPSFLISDWSGNKPCTSSTGPWFGLSCNNSNSGVSIINLPKHKLNGSLSPSLSKLDSLLEIRLAGNNITGTVPSDFTKLKSLRLLDLTDNNIDSPLPNFHDGVKVITVGNPFLINNQTGGSVSPTISGPSSEKNPSHSPSSVKQPVPSSNHKRFKTVATVAGVAGFAVVAFLVVLCFFKNKKALSDAPSSIVVHPRDPSDRGSVVKIAVSSKNTGSLSGKTGTSSLSSLSGETQNSYFIEAGKNVISVQVLRKVTNDFSSENELGRGGFGTVYKGELEDGTNIAVKRMENGVIGNKALDEFQSEIDVLSKVRHRHLVSLLGYSIEGNERLLVYEYMPLGALSQHLFHWRKFELKPLSWAQRLVIALDVARAMEYLHGLARETFIHRDLKSSNILLGNDFRAKVSDFGLVKLAPNGEKSIVTKLAGTFGYLAPEYAVMGKITTKVDVFSYGVVLMELLTGLTALDESRSEEIRYLAEWFWRIKSNKEKLMSAIDPTLEPNEETYESITIVAELAGHCTAREAYHRPDMSHAVNVLGALVEKWRPVNDELDCYSSIDDSRPLPQLLKIWKDAESNEFSYSTTTSLEDSKGSIALRPAGFAESFTSVDGR 953
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g04762 953 Pfam Leucine rich repeat N-terminal domain 333 374 IPR013210 -
Tsu02g04762 953 Pfam Leucine rich repeat N-terminal domain 28 69 IPR013210 -
Tsu02g04762 953 CDD STKc_IRAK 610 880 - -
Tsu02g04762 953 Gene3D Ribonuclease Inhibitor 28 328 IPR032675 -
Tsu02g04762 953 Gene3D Ribonuclease Inhibitor 333 463 IPR032675 -
Tsu02g04762 953 SMART serkin_6 604 880 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g04762 953 ProSitePatterns Protein kinases ATP-binding region signature. 610 632 IPR017441 GO:0005524
Tsu02g04762 953 Gene3D Phosphorylase Kinase; domain 1 567 681 - -
Tsu02g04762 953 SMART LRR_typ_2 94 116 IPR003591 -
Tsu02g04762 953 SMART LRR_typ_2 267 290 IPR003591 -
Tsu02g04762 953 SMART LRR_typ_2 141 164 IPR003591 -
Tsu02g04762 953 SMART LRR_typ_2 194 217 IPR003591 -
Tsu02g04762 953 SMART LRR_typ_2 117 140 IPR003591 -
Tsu02g04762 953 SMART LRR_typ_2 401 424 IPR003591 -
Tsu02g04762 953 SMART LRR_typ_2 425 447 IPR003591 -
Tsu02g04762 953 ProSiteProfiles Protein kinase domain profile. 604 884 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g04762 953 SUPERFAMILY L domain-like 332 445 - -
Tsu02g04762 953 MobiDBLite consensus disorder prediction 465 495 - -
Tsu02g04762 953 SUPERFAMILY Protein kinase-like (PK-like) 582 880 IPR011009 -
Tsu02g04762 953 Pfam Protein kinase domain 605 877 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g04762 953 PANTHER OSJNBA0070M12.3 PROTEIN 8 953 - -
Tsu02g04762 953 ProSitePatterns Serine/Threonine protein kinases active-site signature. 729 741 IPR008271 GO:0004672|GO:0006468
Tsu02g04762 953 Gene3D Transferase(Phosphotransferase) domain 1 682 898 - -
Tsu02g04762 953 SUPERFAMILY L domain-like 26 310 - -
Tsu02g04762 953 PANTHER OSJNBA0070M12.3 PROTEIN 8 953 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g04762 Tsu-Chr2 56735212 56738890 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g04762 85 873 Receptor kinase-like Gene Family AT1G55610 29.825 2.30e-77 273
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IX Tsu02g04762 Pkinase 8.4e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g04762 - - cam:101493565 1535.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g04762 02 56735212 56738890 Tsu02g04762 02 56735212 56738890 ECH