Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g04755 ATGAAAAAATCAAATGGCGTTTACTTTCCTGAGGAGAAAATCTGCAAATGGGTTACTCAATTACTGTTGGCAGTAGAATACCTgcattcaaaatttgttttacacCGTGACCTAAAGTGTTCTAACATCTTTCTTACAAAGGATCATGATGTTCGCTTGGGGGATTTTGGACTTGCTAAGACACTAAAAGCAGATGATTTGACTTCTTCGGTTGTAGGAACTCCCAACTACATGTGTCCTGAACTGCTTACAGATATTCCTTATGGATTTAAATCTGATATTTGGTCACtagGGTGCTGTATATATGAGATGGCTGCTCACCGCCCTGCTTTCAAAGCTTTTGATATGGATGGATTGATAAGCAAGATAAACCGCTCCTCTATTGGTGCTTTGCCTCCCTGTTACTCTCCAACCTTGAAAGCACTGATAAAAGGCATGCTGAGGAAAAACCCCGAGCATCGTCCATCAGCATCCGATATCTTAAAGCACCCTTATTTGCAGACTTATGTTCATCAATATCGTTCATCTCTATGTCCTCCATCAGCCTCTTCTCCTGAAAAGCCAATTTCTGCTGTCCATATTCCTCGGAAAAATATGGCAGAAAGTGAAAACAGTAATAGTTGGAGTAGTGACAAAGGTAGTTTGATGTCAAATGAGAGAAACGCTGCAAAAGCAGCACCAAAGGGTGATAACAAAATCACTGAGGTAGACCTGGCATCAATTGACGATAATGGGTCTGACCTTCTCATGCCAGGTGGAAAAGGAAATAGCTCCAGCAatgtcaatgccaaaacagaTAAACAGGAGATTTGGAAGCAAACTCACATTGAACACCATTCTAATGTTGGATCTAAGCAAGCAAAAGCAGTTAAGAATGTAATGATAGCACCAAAACATGAAAAGCTTAGAGAGACAAGTGCTCCAATGAGAGGCAGTTTGATGAAGGCTGGTGGTATGTCAATACAGAAAATAAATACAGAGACATTGTCTAAATTGCCGAAACCTGATTTTGGTGTTACTGGATTGAAGCCTAATATAGAGGTGCCGACTATTGGACCTTCAAAAGCAACACTGAATTGTGCAAAACGAATCCAAGGATCACATACTACAAAACATCAGTTACAGATGATAGAGTCTACACCAAAAACTAAACCTCGGCATAAAGTGCCGCCTTCTTGTCCTATCAAACAAGTAGTAGCAGAAGCTGTAGTTCCTGCCAAGCCAAAACAAAAGACTCCTCCGAGCCTACTTAAACCACCCTCAATTCTGGGACGTATAAGGCAGGCCGGGCATGATATGCCAAATGCAGCAAATGATACAGTACAGATAAGTCCAAATAAAATAGCTCAGGAGCAAAAGATGGGCCATCATCAGTTGACTAGCGGTCATCTAGCACATGTTTCTAGAGAGCCTTTGAAGGCTTTTAAAAGTAGTACCAAAGGAATACAAACGGACAACAGCAATTCTGTGTCATCTTCCGTCTCTATTCAAGGATTCAAATTTTCTGACTTTGCAACCACTTTTATTGACTTGAGTGAACCAACACTCCCTGAACATGGGAGTTTTAATCACACTGAAAAGGTGGAATCAATTCCAGATAGCATCGGACCTGATGAAATTTTTTCTGgtgaatcctctccatttacaCCAATTTTTCAGAATAATACCATTACTAGTGGTGAGAAATTAAGTCCCAGTTTAACTCTGGATCACTCAGTTCAACATCCTAAGGTAATTTATGCTTCTGGTGACAGCTTTCTCGTAAATAAAACAACTACATCTAGTCCCTGTGAGTGTGATGTTCACTCTGCCGAAGTGACACAAGAAATCAATGACGTTCAAGATATTTCTAAGGAAATGGCTTCAATTAAAACTTTCAGACATTCATTCCCTATTTCTGGAGAAAAGTCTTTTTGTGATGATAGTCCGGTAAGCTTGCCAAATAGTAGGCCTGGTAAAGTTAGCCAATCAAAGCTTATGTGCATCTCGACCGGTGATGACAAATTCATAGTGAGGGAAAGAGTCTCATCAGTGGCTGAAACTTCTCCTCTGAATATATCTACTAAACTTTCAAGCCAGAAAGTTTTACAAGACGAGAAGAGAATGATTTTACAGAATCCAGCAACAGAAAGGCCACCTTCTGGCCATCTCCCCCCAGCTTTTGATGATGTCATCCATGTTATACGACATAGCAGTTATCGTATGGGAAGTGAGCTTCCAGTAAAGGAATCAACTGAGACGGGAGTTACAAATGTAGATGTTGGTAAACTTATCAACATTGTAAAGGATGATTTAGAAATGAGAAACGCGGGAACTCCTTTGTCCCTTAAATCTTCAAATTGCTCTGAAGTTACTAGTCTTAACTCAAGTACTACTGATAATATGGAAATCAGAAACTTGAGCTTGAAGTCAAGTTTTTCTAACTATTCTGGTGTTGAGGAGCATAATGTGAAAAACCCTGATTTTCTAGTTTCAAAACCCGACTCCGCTAAATATACCAAATATAGCCCTCCTACAGCGGAAGAGGAAATACCGGAAAAGGAATCGTTGGATGTTAAATCTTCCAAGCAGAGAGCTGATGCACTTGAAGGGCTGTTAGAATTGTCTGCAGATTTGCTGCAGCAAAATAAATTGGAGGAACTAGCGGTTGTTTTGAAGCCTTTTGGAAAAGATAAGGTCTCTTCAAGGGAGACAGCCATTTGGTTGGCCAAAAGTCTGAAAGGATTCATGTTTGAGGAAAGTGGGGGACGTAGTTAA 2757 0.3943 MKKSNGVYFPEEKICKWVTQLLLAVEYLHSKFVLHRDLKCSNIFLTKDHDVRLGDFGLAKTLKADDLTSSVVGTPNYMCPELLTDIPYGFKSDIWSLGCCIYEMAAHRPAFKAFDMDGLISKINRSSIGALPPCYSPTLKALIKGMLRKNPEHRPSASDILKHPYLQTYVHQYRSSLCPPSASSPEKPISAVHIPRKNMAESENSNSWSSDKGSLMSNERNAAKAAPKGDNKITEVDLASIDDNGSDLLMPGGKGNSSSNVNAKTDKQEIWKQTHIEHHSNVGSKQAKAVKNVMIAPKHEKLRETSAPMRGSLMKAGGMSIQKINTETLSKLPKPDFGVTGLKPNIEVPTIGPSKATLNCAKRIQGSHTTKHQLQMIESTPKTKPRHKVPPSCPIKQVVAEAVVPAKPKQKTPPSLLKPPSILGRIRQAGHDMPNAANDTVQISPNKIAQEQKMGHHQLTSGHLAHVSREPLKAFKSSTKGIQTDNSNSVSSSVSIQGFKFSDFATTFIDLSEPTLPEHGSFNHTEKVESIPDSIGPDEIFSGESSPFTPIFQNNTITSGEKLSPSLTLDHSVQHPKVIYASGDSFLVNKTTTSSPCECDVHSAEVTQEINDVQDISKEMASIKTFRHSFPISGEKSFCDDSPVSLPNSRPGKVSQSKLMCISTGDDKFIVRERVSSVAETSPLNISTKLSSQKVLQDEKRMILQNPATERPPSGHLPPAFDDVIHVIRHSSYRMGSELPVKESTETGVTNVDVGKLINIVKDDLEMRNAGTPLSLKSSNCSEVTSLNSSTTDNMEIRNLSLKSSFSNYSGVEEHNVKNPDFLVSKPDSAKYTKYSPPTAEEEIPEKESLDVKSSKQRADALEGLLELSADLLQQNKLEELAVVLKPFGKDKVSSRETAIWLAKSLKGFMFEESGGRS 918
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g04755 918 PANTHER SERINE/THREONINE-PROTEIN KINASE NEK 1 902 - -
Tsu02g04755 918 SUPERFAMILY Protein kinase-like (PK-like) 4 213 IPR011009 -
Tsu02g04755 918 ProSitePatterns Serine/Threonine protein kinases active-site signature. 33 45 IPR008271 GO:0004672|GO:0006468
Tsu02g04755 918 PANTHER SERINE/THREONINE-PROTEIN KINASE NEK5-LIKE 1 902 - -
Tsu02g04755 918 ProSiteProfiles Protein kinase domain profile. 1 166 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g04755 918 SMART serkin_6 1 166 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g04755 918 MobiDBLite consensus disorder prediction 197 231 - -
Tsu02g04755 918 Pfam Protein kinase domain 7 166 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g04755 918 MobiDBLite consensus disorder prediction 828 849 - -
Tsu02g04755 918 MobiDBLite consensus disorder prediction 199 217 - -
Tsu02g04755 918 Gene3D Transferase(Phosphotransferase) domain 1 1 237 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g04755 Tsu-Chr2 56683257 56688706 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g04755 9 177 MAP Kinase Kinase Kinase AT1G53570 36.257 7.69e-27 114
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK NEK Tsu02g04755 Pkinase 6.3e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g04755 K08857 - gmx:100818943 1221.45
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g04755 02 56683257 56688706 Tsu02g04755 02 56683257 56688706 ECH
Tsu02g04755 02 56683257 56688706 Tsu06g01299 06 12260024 12265030 PCT