Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g04745 ATGGAAATGGTTTCTAAGGAAGCTCAGATGTCTATTGCTGCTTCTTCTATGTTTCCTGGTTTTAGATTTTGTCCTACTGATGAAGAGTTGATTTCTTATTAtcttagaaaaaaattagatgGTCATGAAGAAAGTGTTCAGGTTATTTCTGAGGTTGAACTTTGTAAATATGAACCTTGGGATTTACCAGCCAAATCATTCATTCAATCAGATAACGAGTGGTTCTTCTTCTCACCCCGTGGAAGAAAGTATCCAAACGGTTCACAAAGTAAAAGAGCTACTGATTGTGGCTATTGGAAAGCCACTGGAAAAGAGCGCAATGTGAAATCAGGTTGTAACGTCATAGGTACAAAACGAACTTTGGTGTTTCACTTAGGTCGTGCACCTAAAGGTGAAAGGACAGAATGGATTATGCATGAGTATTGCGTCAGTGACAGGTCTCCGGATTCTTTGGTAGTTTGTCGTCTCAAGAGGAATACAGAGTTTCGTGTGAACGATGCTTCCAATAGAGCCTCTTCAAGTCAAGTTAACCCGGTGCATTCACATGAAAGTGAATGTGCTGTCTCAGAAGGTGGTATTGATGATCAAAGGCGCATTTGTGATCATGAACAAGAAAAGGAGGTTGATGGTAGTTCCAGGCGTGGCAGCAGCAGTTACGGTTCACCTTCAATGGAACAAATTGATTCCGTTTCGGAATCAAATCAGCGACCAGCTAATGATGCTACTTTGACAGACTCGTCGGGCCAACTAAAGATGGAGGAAGAGGATTGTTATGCTGAGATACTAAAGAATGATATCATAAAATTAGATGAATCATCAATGTCTCAAGGGGCTCAAACAAGACCACATGACCTTGCATATTCTCATCCTCGCCAAGGCACTGCACAGAGGAGAATACGATTAAGGGTTGCGAAATCAACACCTTCTCAACCAGGAGTTCGTTTCTCAAGAACAATGCACCAATCAAAGAGTAGCTTCTTTGCTAGAATGACCAACCGTTTGATGATATTTGCTTTCTTTGTTTTCACTCTTATGGctatatttttttggtctttaatGGGTGGTCACAAACAAGCGAGAAATATTGTAGGGAAATTTCGGGCCCCCATGGCTTCACCAACCTCCACATCAAGTATAGGCTCTAACCATTCTGTTCTAGCAGCCACAAAGCAACCATGGTCGTCCCTTATGCATATACCAATTCCGACTTTGTTATTAGTAAGTGAAAAAAATGCATCAATGTTGCACTTGTATCTTCCGGGGCTTGGTTTGATCCACTTTTTCGAGTGGAAACAACCGCTTGTGGCCGATGTTGAGTCGAATTCCAGTTTAACTCAAAAGCAACATCGTATTTCTAATGCTGAAGAAACCGTTAAGGAGAagATTATTTTAGTGCAAGAGAAAAACATTCGAAGACTGAATGAGCTTGTCCGACATCTTCAAGAACAACTACAACAGTGTAAAGGAAACAATGGAACTATAAATAGCACTACAGTCCCTCTAACTGAGCGGATTCTTGAGCTTGAGCGACAACAAATTTTAGAGGATTAA 1551 0.401 MEMVSKEAQMSIAASSMFPGFRFCPTDEELISYYLRKKLDGHEESVQVISEVELCKYEPWDLPAKSFIQSDNEWFFFSPRGRKYPNGSQSKRATDCGYWKATGKERNVKSGCNVIGTKRTLVFHLGRAPKGERTEWIMHEYCVSDRSPDSLVVCRLKRNTEFRVNDASNRASSSQVNPVHSHESECAVSEGGIDDQRRICDHEQEKEVDGSSRRGSSSYGSPSMEQIDSVSESNQRPANDATLTDSSGQLKMEEEDCYAEILKNDIIKLDESSMSQGAQTRPHDLAYSHPRQGTAQRRIRLRVAKSTPSQPGVRFSRTMHQSKSSFFARMTNRLMIFAFFVFTLMAIFFWSLMGGHKQARNIVGKFRAPMASPTSTSSIGSNHSVLAATKQPWSSLMHIPIPTLLLVSEKNASMLHLYLPGLGLIHFFEWKQPLVADVESNSSLTQKQHRISNAEETVKEKIILVQEKNIRRLNELVRHLQEQLQQCKGNNGTINSTTVPLTERILELERQQILED 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g04745 516 MobiDBLite consensus disorder prediction 166 182 - -
Tsu02g04745 516 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 11 362 - -
Tsu02g04745 516 PANTHER NAC DOMAIN-CONTAINING PROTEIN 89 11 362 - -
Tsu02g04745 516 MobiDBLite consensus disorder prediction 275 294 - -
Tsu02g04745 516 Pfam No apical meristem (NAM) protein 19 142 IPR003441 GO:0003677|GO:0006355
Tsu02g04745 516 ProSiteProfiles NAC domain profile. 17 159 IPR003441 GO:0003677|GO:0006355
Tsu02g04745 516 MobiDBLite consensus disorder prediction 166 249 - -
Tsu02g04745 516 Coils Coil 463 490 - -
Tsu02g04745 516 Gene3D NAC domain 26 164 IPR036093 GO:0003677|GO:0006355
Tsu02g04745 516 SUPERFAMILY NAC domain 5 158 IPR036093 GO:0003677|GO:0006355
Tsu02g04745 516 MobiDBLite consensus disorder prediction 213 248 - -
Tsu02g04745 516 MobiDBLite consensus disorder prediction 187 212 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g04745 Tsu-Chr2 56580998 56599519 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g04745 4 282 NAC Transcription Factor Family AT2G27300 52.330 4.02e-91 280
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Tsu02g04745 NAM 3.2e-34 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g04745 - - mtr:MTR_2g086880 790.415
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g04745 02 56580998 56599519 Tsu02g04745 02 56580998 56599519 ECH