Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g04734 ATGGAGGATCCACCAACTGGTTTTCGTTTCTACCCAACAGAAGAAGAGCTAGTTGGATTCTATCTACACAACCAGCTTGAAGGACAAATGCATCATCATATAAACAAAGTCATCCCTATCATTGATATCAATGGCAAAGAGCCATGGGATCTTCCAACATTTGCAGGGGAGAAATGTAGTGGAGAGACAGAACAATGGTTTTTCTTTTCACCAAGACAAGAAATTGAGTTGAGAGGAGGAAGACCTAACAGAACAACATCTTGTGGATATTGGAAAGCCACAGGTTCACCAAGCTGCGTTTACTCTTCTAAAAACAAAGTGATTGGGATAAAGAAAACCATGGTGTTTTACAAAGGGAAAGCTCCTTCTGGAAGAAAAACTAAATGGAAAATGCATGAATACAAAGCCATTGAACAACACTCTCACCCTTCTAACTCAAACCCTCCTAagTTGCGACACGAATTCAGCTTGTGTCGCATTTATGTGATATCGGGAAGCTTTCGTTCATTTGATCGAAGACCATTAGAAATACCAAAAGTAGAGTTACGACTTGATCATATCGCTTCAACGTCTCAACAAGTGGTAGCAGAGCTGGATGGATCAAGCTTGTGGGCAACTACCCACTCAGAAGGGGTAGGAAGATATcatgataatgctcttattggaGGGTCAAGTGGAACAAATTGGAATAATGTAGCACACAATGGGGTTAATGAACCTGAAGTGCCTCTTTGGGAATGGGACCATCTAAATTGGATGTAA 762 0.399 MEDPPTGFRFYPTEEELVGFYLHNQLEGQMHHHINKVIPIIDINGKEPWDLPTFAGEKCSGETEQWFFFSPRQEIELRGGRPNRTTSCGYWKATGSPSCVYSSKNKVIGIKKTMVFYKGKAPSGRKTKWKMHEYKAIEQHSHPSNSNPPKLRHEFSLCRIYVISGSFRSFDRRPLEIPKVELRLDHIASTSQQVVAELDGSSLWATTHSEGVGRYHDNALIGGSSGTNWNNVAHNGVNEPEVPLWEWDHLNWM 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g04734 253 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 5 253 - -
Tsu02g04734 253 Gene3D NAC domain 13 166 IPR036093 GO:0003677|GO:0006355
Tsu02g04734 253 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 5 253 - -
Tsu02g04734 253 ProSiteProfiles NAC domain profile. 4 163 IPR003441 GO:0003677|GO:0006355
Tsu02g04734 253 Pfam No apical meristem (NAM) protein 5 135 IPR003441 GO:0003677|GO:0006355
Tsu02g04734 253 SUPERFAMILY NAC domain 4 161 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g04734 Tsu-Chr2 56493590 56495603 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g04734 1 252 NAC Transcription Factor Family AT5G22380 50.988 2.09e-81 242
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Tsu02g04734 NAM 3.8e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g04734 - - gmx:100784960 351.673
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g04734 02 56493590 56495603 Tsu02g04734 02 56493590 56495603 ECH
Tsu02g04734 02 56493590 56495603 Tsu06g01334 06 12568293 12570057 PCT