Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g04711 ATGGCAAGTCAAAGATTAGGAGAGCTTGATTTTTCTGAGGCAGCAGGACATTATGGAATTCATCATAGGATTAACAATTCTTCATCAAGCTTAATGAATGAAGAatctggttttgattttggggAACTAGAAGAAGCAATAGTTCTGCAAGGAGTTAAGAGTAGAAATGATGAAACAAAATCATCTTTTTTCACAGCCAGACCTGCTTCTGCTACACTGGAAATGTTCCCTTCTTGGCCAATGAGATTCCACCAATCCTCAACAGGAGGGAATAAATCAGGAGGGGAAAGCAGTGATTCAGCATTATCAAGCAAAAATGAGAACCCTTTTGAATCAGAATCATCACCATTAAGTTGTAAAAAAGCATCTACATTTGATGAAGAGAATCTACAGCTACAGCAACAGAATATGATAACAAATGATGCTATAAAAACAGGCTCTTCATCACAGAATCAATCAGTAGCAAAAGAAAAGAAAAAGGGAGGTGGTTCAGCATCAGATAAGCCACTAGATGCAAAgACATTGAGACGTTTAGCACAAAACAGAGAAGCTGCAAGAAAAAGTCGCCTAAGAAAAAAGGCTTATGTACAACAACTAGAGTCAAGTAGATTAAAGCTTACACAATTGGAACAAGATCTTCAAAGAGCACGCTCTCAgGGTATGTTCATGGATTGGAATGGTGGTGTTGGAGGCAACATAAGTTCTgGAGGTGCAATGTTTGATATGGAATATGCAAGATGGTTAGAAGAAGACAACCGTTTATTAACGGAGTTAAGAAACGGATTACAAGCGGCGTTATCGGATGGAGAAATGAGAGTAATGGTGGATGGGTATTTATGTCATTATGATCAAATATTTAGAGTCAAGACTGTCACTGCTAAATCAGACGTCTTTCATCTTATTAATGGCATCTGGACTTCTCAAGCTGAACGTTGTTTTCTTTGGATTGGTGGCTTTAGACCTTCTGAAATTATCATGATGTTGATCCAACAATTAGAGCCACTAGCAGAGCAACAAATAATGGGAATGTATGGATTAAGACATTCATCACAGCAAGCAGAAGAAGCACTCTCTCAAGGACTTGATCAGTTGCAACAATCTCTTGTTGATACCATTGCTGGAGGACCTCTTGTTGATGGTGTTCAACAAATGGTTGTTGCTATGGGAAAACTTTCTAATCTCGAAGGATTTCTTCGTCAGGCCGATAATTTGAGGCAACAAACTCTTCACCAATTATGTCGATTACTCACACTTCGTCAAGCAGCACGCTCTTTTCTTGTTATCGGAGAGTACTATGGGCGACTTCGAGCCCTTAGTTCTTTGTGGGCTTCAAGACCACGAGAGACCATGATGAGTGATGATAACTCATGCCAAACAACTACAGACATGCAAATGGTTCAACCTTCTCAGAATCATTTCTCCAATTTCTGA 1431 0.3857 MASQRLGELDFSEAAGHYGIHHRINNSSSSLMNEESGFDFGELEEAIVLQGVKSRNDETKSSFFTARPASATLEMFPSWPMRFHQSSTGGNKSGGESSDSALSSKNENPFESESSPLSCKKASTFDEENLQLQQQNMITNDAIKTGSSSQNQSVAKEKKKGGGSASDKPLDAKTLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTQLEQDLQRARSQGMFMDWNGGVGGNISSGGAMFDMEYARWLEEDNRLLTELRNGLQAALSDGEMRVMVDGYLCHYDQIFRVKTVTAKSDVFHLINGIWTSQAERCFLWIGGFRPSEIIMMLIQQLEPLAEQQIMGMYGLRHSSQQAEEALSQGLDQLQQSLVDTIAGGPLVDGVQQMVVAMGKLSNLEGFLRQADNLRQQTLHQLCRLLTLRQAARSFLVIGEYYGRLRALSSLWASRPRETMMSDDNSCQTTTDMQMVQPSQNHFSNF 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g04711 476 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 176 191 IPR004827 GO:0003700|GO:0006355
Tsu02g04711 476 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 171 215 IPR004827 GO:0003700|GO:0006355
Tsu02g04711 476 PANTHER TRANSCRIPTION FACTOR TGA9 61 455 - -
Tsu02g04711 476 MobiDBLite consensus disorder prediction 81 118 - -
Tsu02g04711 476 SMART brlzneu 169 235 IPR004827 GO:0003700|GO:0006355
Tsu02g04711 476 MobiDBLite consensus disorder prediction 160 174 - -
Tsu02g04711 476 Pfam bZIP transcription factor 172 214 IPR004827 GO:0003700|GO:0006355
Tsu02g04711 476 ProSiteProfiles DOG1 domain profile. 237 445 IPR025422 GO:0006351|GO:0043565
Tsu02g04711 476 SUPERFAMILY Leucine zipper domain 173 215 IPR046347 GO:0003700|GO:0006355
Tsu02g04711 476 MobiDBLite consensus disorder prediction 455 476 - -
Tsu02g04711 476 CDD bZIP_HBP1b-like 173 223 - -
Tsu02g04711 476 MobiDBLite consensus disorder prediction 144 174 - -
Tsu02g04711 476 PANTHER TRANSCRIPTION FACTOR TGA9 61 455 - -
Tsu02g04711 476 Pfam Seed dormancy control 255 328 IPR025422 GO:0006351|GO:0043565
Tsu02g04711 476 Coils Coil 192 219 - -
Tsu02g04711 476 Gene3D - 172 221 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g04711 Tsu-Chr2 56271588 56277416 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g04711 127 476 bZIP Transcription Factor Family AT1G08320 67.514 2.42e-178 502
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Tsu02g04711 DOG1 9.2e-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g04711 K14431 - gmx:100775461 679.093
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g04711 02 56271588 56277416 Tsu02g04711 02 56271588 56277416 ECH