Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g04710 ATGGGTTCATATGCTACTTGGAGTTGTCTAAAATATTTGCCACATAGACTTGCAGGGTTGGCACTAATAGCACCAGTTATCAATTACAGATGGCCTTCTCTCCCTGGGAGTCTGATAAGAGAGGACTATAGAAGGAGATTTATTAAGTGGGCACTATGGCTTGCAAATCACTGTCCTAAACTATTGCAGTGGTGGGTCTCTCAAAAGTGGCTACCTTCAAATGCTGTTATAGAAAAAAATCCAacatttttcaacaaaaatgaTATAGATATTTTGAAGACTATTCCTGGGTTCCCAATGTTATCAAAGGACAGGTTAAGGGAACAAGTTGTTTTCGACACACTTCGCCATGATTGGAGGGTAGCATTTGGAAAATGGGAGTTTGATCCAATGAAACTAAGCAATCCATTCCCTAACAAACAAAacaaaaattcttggtttgttcaaattttagGACCCTCACAAGCATCCATGGCTCTACAAGTACAACATATGGATCAAGAGGTTCAATtgcaagaacaagaagaagctACAAATGCTCAACCAAGCAAACAAAACTCAATACTCTCACTTACCCTTGATGAGTTCCAATGCAAAAGTGGAAAGAGTTTTGGTTCCCTCAACATGGATGAGTTCATAGCTAGCATTTGGAGTTCCAACGATGAAGCCTCGACTCAAACCGAGAAGAATACTAAAAATGTTGCAACAACAGAACAAACCATTTGTCAAGATGGTAACTCATTTTCTGTCCCTCCACCAATTTGCAAGAAAACTGTCGATGAAGTTTGGTCGGAGATTCATAAGAATGCGCCACAattcaaagaagaaaataacCTTCAAAGAAACGAAACTCTCGTGAAGCAACAAACACTTGGAGAATTGACTTTGGAAGATTTCTTAGTAAAAGCTGGTGTTGTACAACAATCATTTCCATTTCAGAATCATAGTAGCAATGTTATGAGGAATGTGACACCAGTGAATCTTGCAAGTTTTGCTTTGAGGCCTTCGATGGGAATGGGATTTTCTAATCAATGTGTGTCGAGTAATGGTCTTGCAACATACCAAATGCTGTCGCAGAATAACAACTTAGGAGTGCAGGATCAAGTGGCTGAATCAAGTAATAGGAAGAGGATAATTAATGGTCCTCCTGATGTTGTGGTGGAGCGAAGGCAACGTAGAATGTTGAAGAATCGAGAATCTGCTGCTCGTTCTCGTGCTAGAAGACAGGCATATACGGTAGAGCTCGAAGCAGAGCTGAATCTGCTAAAAGAAGAGAATGAAAAGCTGAAACAAGTTCTGGCTGAAGCCGAGCGCAAGCGGAAACAAGAGCTTTTACAAAGAAAGCCTCCAACAAAGGCACAAAAGGGGACAGCAAAATTAAGAACATTAAGAAGGCCTATAAGTGCAATCTGGTGA 1416 0.3849 MGSYATWSCLKYLPHRLAGLALIAPVINYRWPSLPGSLIREDYRRRFIKWALWLANHCPKLLQWWVSQKWLPSNAVIEKNPTFFNKNDIDILKTIPGFPMLSKDRLREQVVFDTLRHDWRVAFGKWEFDPMKLSNPFPNKQNKNSWFVQILGPSQASMALQVQHMDQEVQLQEQEEATNAQPSKQNSILSLTLDEFQCKSGKSFGSLNMDEFIASIWSSNDEASTQTEKNTKNVATTEQTICQDGNSFSVPPPICKKTVDEVWSEIHKNAPQFKEENNLQRNETLVKQQTLGELTLEDFLVKAGVVQQSFPFQNHSSNVMRNVTPVNLASFALRPSMGMGFSNQCVSSNGLATYQMLSQNNNLGVQDQVAESSNRKRIINGPPDVVVERRQRRMLKNRESAARSRARRQAYTVELEAELNLLKEENEKLKQVLAEAERKRKQELLQRKPPTKAQKGTAKLRTLRRPISAIW 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g04710 471 Coils Coil 408 446 - -
Tsu02g04710 471 PANTHER BZIP TRANSCRIPTION FACTOR 162 471 - -
Tsu02g04710 471 Pfam bZIP transcription factor 389 441 IPR004827 GO:0003700|GO:0006355
Tsu02g04710 471 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 162 471 IPR043452 GO:0003700|GO:0045893
Tsu02g04710 471 SMART brlzneu 385 446 IPR004827 GO:0003700|GO:0006355
Tsu02g04710 471 SUPERFAMILY Leucine zipper domain 389 438 IPR046347 GO:0003700|GO:0006355
Tsu02g04710 471 Gene3D - 387 443 - -
Tsu02g04710 471 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 387 439 IPR004827 GO:0003700|GO:0006355
Tsu02g04710 471 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 392 407 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g04710 Tsu-Chr2 56250736 56266921 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g04710 166 471 bZIP Transcription Factor Family AT3G44460 43.902 3.13e-66 214
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Tsu02g04710 bZIP_1 2.8e-09 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g04710 - K14432 gmx:100799576 317.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g04710 02 56250736 56266921 Tsu02g04710 02 56250736 56266921 ECH