Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g04705 ATGGCAGGGGTTGGTGGGAAGGCTGAAAATTGTTGGTTTCCTACTCTTGTTAGTAGTGTTTTGGGGAATGATAACTATATTAGTTTATGGAAAGAGAAGTGGTTCGAAGCTGCTCCGTTAAGGTATTTATTTCCTAGTTTATTGGAAAAAGATTTGCATAAAGACTGCGTGGTGTTGGATTTAATTCAGCGAGGTTGCAATCTTTTGAATTGGAATCGAGATTGGTTAACATCTTTAACGCAAACTGAACTGGTAGAGAAGTCAGAATTAGAGCAGCTTTCGTTCAgcgtaaaatttgcttatatctTTCTGCATTCGCGAATTGAGTCAACTATCACCGAACCAGATTTATTGAATGTTTTACATAAACTGTGGAATAATGATATCTCATCGAATTCGAAGGTGAGAGTGTTTGGATGGCATTCTCTCAATCGTTTTCTTCTTAACCTCTCCAACTTCGGAGATTCGATAACAACAATTCTCTCTAACGGAAAAAAGAATGGCGGAAGAACGCAGATGCCAAACACCGCAATTATGCGTCAACAATTGCGATGTTATCGTGATTTACAGCTTAAGGAACAACAAGCTTCATCGGCAAAGCTTGTTCTCAATCAATCAATCGTAGCACCGACGAATTCTCCGCCGGTGGCGGTGGTTACTGAACCGTCTTCTTCATCTCCGGATCCTGTTGCACCGCCTAGCGATGTGGTGGAGGAGAAACCGATGAAACAGAATCGGTGTATGACATGTAGGAAGCGCGTGGGACTCACGGGGTTTAAGTGCAAGTGTGGGATGATGTTGTGTGGGACCCACCGTTATCCTGAACAGCATGATTGTGAATTTGATTTCAAGGGATTGGGAAAAGAGCAGATCGCGAAGGCGAATCCTGTGGTGAAAGGAGAAAAGCTTGAGAAGATTTGA 921 0.418 MAGVGGKAENCWFPTLVSSVLGNDNYISLWKEKWFEAAPLRYLFPSLLEKDLHKDCVVLDLIQRGCNLLNWNRDWLTSLTQTELVEKSELEQLSFSVKFAYIFLHSRIESTITEPDLLNVLHKLWNNDISSNSKVRVFGWHSLNRFLLNLSNFGDSITTILSNGKKNGGRTQMPNTAIMRQQLRCYRDLQLKEQQASSAKLVLNQSIVAPTNSPPVAVVTEPSSSSPDPVAPPSDVVEEKPMKQNRCMTCRKRVGLTGFKCKCGMMLCGTHRYPEQHDCEFDFKGLGKEQIAKANPVVKGEKLEKI 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g04705 306 SUPERFAMILY AN1-like Zinc finger 234 301 IPR035896 -
Tsu02g04705 306 ProSiteProfiles Zinc finger AN1-type profile. 241 287 IPR000058 GO:0008270
Tsu02g04705 306 Pfam AN1-like Zinc finger 247 283 IPR000058 GO:0008270
Tsu02g04705 306 MobiDBLite consensus disorder prediction 213 236 - -
Tsu02g04705 306 PANTHER AN1-TYPE ZINC FINGER PROTEIN 184 306 - -
Tsu02g04705 306 SMART AN1_Zf_4 247 284 IPR000058 GO:0008270
Tsu02g04705 306 PANTHER ZINC FINGER A20 AND AN1 DOMAIN-CONTAINING STRESS-ASSOCIATED PROTEIN 3 184 306 - -
Tsu02g04705 306 Gene3D - 221 302 IPR035896 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g04705 Tsu-Chr2 56177651 56182336 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g04705 243 306 C2H2 Transcription Factor Family AT3G52800 70.312 5.96e-29 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g04705 - - gmx:100807363 179.874