Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g04697 ATGAATGTCATTGACTATGCTCATCAACGAGGGAGGGGAATTTGCTTTCTCAGTGGAAGCGGATTAGTGGCGCAAGTCACACTTCGTCTATCCACTGGAAAAATTGGAACCCTTTGGGGAATATTTCAGATTCTTTCAATATCTGGAAAGATTCTCCTGCCGCCAACACGAGTGAGTTTTGGTGGATTGACAGTACTGGGGGATGTGATTCCCCCTTTGGTGGCTTTCGGCCCAGTGAAGTTGACGACCGCTTCTTTTGCAAACATTGCTTATGAAAggtccTCTTCTCCGTTCCTGTGCTCTTCCAAGTCCCACCGCACCGTCGCGTCCTCCCTGAATAACCGTCTTCACAACAACGAGTTGCAATATGGCTCTTTATCAGATGAAGAACGAGCTTTCGTATTTCAGGAGAAAACTTGA 420 0.4595 MNVIDYAHQRGRGICFLSGSGLVAQVTLRLSTGKIGTLWGIFQILSISGKILLPPTRVSFGGLTVLGDVIPPLVAFGPVKLTTASFANIAYERSSSPFLCSSKSHRTVASSLNNRLHNNELQYGSLSDEERAFVFQEKT 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g04697 139 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 3 93 IPR014476 GO:0003680
Tsu02g04697 139 SUPERFAMILY AF0104/ALDC/Ptd012-like 3 96 - -
Tsu02g04697 139 Pfam Plants and Prokaryotes Conserved (PCC) domain 3 87 IPR005175 -
Tsu02g04697 139 ProSiteProfiles PPC domain profile profile. 1 115 IPR005175 -
Tsu02g04697 139 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 29 3 93 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g04697 Tsu-Chr2 56078582 56081561 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g04697 3 93 AT-hook Motif Nuclear Localized (AHL) Family AT4G17800 44.660 1.75e-15 69.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g04697 - - tss:122660049 90.8929