Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g04692 ATGAAGGATCCAGAGGAAACTGTTGTAGGAgagttaaatttgaattttgcaCGTGTTCTTGAGCAGCTCAAGGTGGTCTATCCCGACAACGACCTTGGTGGTCTTGGTTTAAGCATGAATATTAGAGGGGGATCGTCTAGTGCCCCTCAATGGCCCTTTTGGTGTCATGAAGAGAGCCCGACACATCTAGGAGGAGACAATGTCCTTGGCTTAGGTCACTTTTGGGCCGTGTGTCTCTCTGTAGTGTTTGTGAGCGAGCTAAGCTCAGATACGTTCCATTTTTTGCATCGTGCCTCTGAAACTCTCTCTGGTGAAACCCTAAATCTCATTCTTCCGCCATTTCCATCGAAAATGAAGGTTATCGCTGCTTACTTGTTGGCCGTTTTGGGAGGCAACGCATCCCCTTCAGCTTCTGATGTTAAACAAATTCTTGGATCAGTTGGAGTTGATGCTGAGGATAGCAACATTGAGTTGCTCCTAAGTGAAGTTAAGGGCAAAGACTTCGCCGAGCTTATTGCTAGTGGTAGAGAAAAGTTGGCTTCAGTTCCTTCTGGTGGCGGTGCTGTTGCAGTTTCTGCTGCACCAGGAGGTGCTGCAGCTGCCGCACCTGCTGCCGAAGCTAAGGAGGAGAAGAaggttgaagaaaaagaagaatccGATGATGATATGGGATTCAGCTTATTCGATTAA 690 0.4507 MKDPEETVVGELNLNFARVLEQLKVVYPDNDLGGLGLSMNIRGGSSSAPQWPFWCHEESPTHLGGDNVLGLGHFWAVCLSVVFVSELSSDTFHFLHRASETLSGETLNLILPPFPSKMKVIAAYLLAVLGGNASPSASDVKQILGSVGVDAEDSNIELLLSEVKGKDFAELIASGREKLASVPSGGGAVAVSAAPGGAAAAAPAAEAKEEKKVEEKEESDDDMGFSLFD 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g04692 229 MobiDBLite consensus disorder prediction 200 229 - -
Tsu02g04692 229 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P2A-LIKE 78 229 - -
Tsu02g04692 229 Hamap 50S ribosomal protein L12 [rpl12]. 119 229 IPR027534 GO:0003735|GO:0005840|GO:0006414
Tsu02g04692 229 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN FAMILY MEMBER 78 229 IPR044076 GO:0002182|GO:0003735|GO:0022625
Tsu02g04692 229 Gene3D - 117 175 IPR038716 -
Tsu02g04692 229 CDD Ribosomal_P2 118 229 IPR044076 GO:0002182|GO:0003735|GO:0022625
Tsu02g04692 229 MobiDBLite consensus disorder prediction 205 219 - -
Tsu02g04692 229 Pfam 60s Acidic ribosomal protein 134 228 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g04692 Tsu-Chr2 56025805 56029459 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g04692 118 229 Cytoplasmic Ribosomal Protein Gene Family AT3G44590 70.536 1.10e-32 113
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g04692 K02943 - pvy:116129032 126.716
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g04692 02 56025805 56029459 Tsu02g04692 02 56025805 56029459 ECH