Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g04687 ATGGACCCATGGCTCGACGATCTCACCGACGACCTTCAAAGCCTAAGCTTCGCCTCCACAACCACCACAACCGCCGACATCAAACGAAGCACAAGCTTCGGTTCAACAACAACCGCTTCAACCTCCGCTCATCTCTCAACAAGATCCCTAAATCCACCAATCACTAAACACCACGCTCCTTTATCCGACCCTCGCTGGTCCGCCATTCACCGGATCAGATCAGAATCACCTTCTCGTCATATCCTTCCTTCTGACTTACGATTCTCTCGCCGTCTCGGCTCCGGCGATATTAGTTCCGTATATCTTGCTGAACTTAATGACGACGGAAAAATTCCGGCGATGTTCGCCGCGAAAGTGATGGATAAGAAGGAGTTAGTCAGTAGAAGCAAAGAAGGAAGAGCGAAAACGGAGAGAGAAATACTTGAATCTCTTGATCATCCTTTTTTGCCTACTCTTTATGCTACAATTGATGCTGCGAAATGGCTTTGTCTTTTGACGGAGTTTTGTCCCGGAGGTGATCTTCATGTTCTCCGGCAACGGCAACAAAATAAACGGTTTTCTGAATCCGCCGTTAGATTCTATGCATCAGAGGTGTTGATGGCACTTGAATACCTTCACATGTTGGGAATAGTATACCGTGATCTCAAGCCAGAAAATGTGTTAGTAAGATCAGATGGTCATATCATGCTCACAGATTTTGATCTCTCATTAAAATGTGATGCTGCTGCTTCAACACCAGCCCAGATAATAATCTCAAGTCAAAACTCTCCACAAGTAATCCCACAAAAAAATCCACACACTGAATCCTCTCAATTTGCCTCATCTTCATGCATACTACCTAATTGTATTGTCCCAGCAGTATCTTGTTTCCAACCAAAACGCAAacgaaagaagaaacaaaaccaACTTAATGGGCCTGAGTTTGTTGCTGAGCCCATTGATGTTCGATCCATGTCATTTGTTGGGACCCATGAATACTTGGCTCCTGAGATAGTGTCTGGTGAAGGACATGGTAGTGCTGTTGATTGGTGGACCTTAggaatatttatatttgaattattttatggCGTGACACCTTTTAGAGGGTTGGATAATGAATTAACTCTAGCAAATATTGTGGCTCGAGCTTTGGAGTTTCCAAAGGAACCCACCGTGCCAGCCACGGCAAAAGATCTTATCTCACAGTTATTGGTTAAGGATCCAGCTAGGAGACTAGGATCAATAATGGGAGCTTCTACAATCAAACACCACTCGTTTTTTCAAGGTGTGAATTGGGCATTGTTAAGGTGTACAACTCCACCTTATGTTCCACCACCTTATACTAAAGATAATAAAGATGATTTATCTGATGATAGTTGTCCTCAAACTCCTGTTGATTATTATTGA 1386 0.4228 MDPWLDDLTDDLQSLSFASTTTTTADIKRSTSFGSTTTASTSAHLSTRSLNPPITKHHAPLSDPRWSAIHRIRSESPSRHILPSDLRFSRRLGSGDISSVYLAELNDDGKIPAMFAAKVMDKKELVSRSKEGRAKTEREILESLDHPFLPTLYATIDAAKWLCLLTEFCPGGDLHVLRQRQQNKRFSESAVRFYASEVLMALEYLHMLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDAAASTPAQIIISSQNSPQVIPQKNPHTESSQFASSSCILPNCIVPAVSCFQPKRKRKKKQNQLNGPEFVAEPIDVRSMSFVGTHEYLAPEIVSGEGHGSAVDWWTLGIFIFELFYGVTPFRGLDNELTLANIVARALEFPKEPTVPATAKDLISQLLVKDPARRLGSIMGASTIKHHSFFQGVNWALLRCTTPPYVPPPYTKDNKDDLSDDSCPQTPVDYY 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g04687 461 Pfam Protein kinase domain 317 420 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g04687 461 Pfam Protein kinase domain 89 298 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g04687 461 Gene3D Transferase(Phosphotransferase) domain 1 173 284 - -
Tsu02g04687 461 Gene3D Transferase(Phosphotransferase) domain 1 316 438 - -
Tsu02g04687 461 MobiDBLite consensus disorder prediction 32 61 - -
Tsu02g04687 461 SMART serkin_6 86 420 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g04687 461 MobiDBLite consensus disorder prediction 439 461 - -
Tsu02g04687 461 SUPERFAMILY Protein kinase-like (PK-like) 67 452 IPR011009 -
Tsu02g04687 461 ProSiteProfiles Protein kinase domain profile. 86 420 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g04687 461 ProSitePatterns Serine/Threonine protein kinases active-site signature. 210 222 IPR008271 GO:0004672|GO:0006468
Tsu02g04687 461 PANTHER OS11G0150700 PROTEIN 1 461 - -
Tsu02g04687 461 PIRSF ILK 287 406 - -
Tsu02g04687 461 PIRSF ILK 20 279 - -
Tsu02g04687 461 PANTHER FLIPPASE KINASE 1-RELATED 1 461 - -
Tsu02g04687 461 MobiDBLite consensus disorder prediction 32 53 - -
Tsu02g04687 461 Gene3D Phosphorylase Kinase; domain 1 85 172 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g04687 Tsu-Chr2 55923739 55930163 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g04687 1 461 AGC Kinase Gene Family AT3G44610 64.059 0.0 573
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Tsu02g04687 Pkinase 1.5e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g04687 K08286 - gmx:100792738 704.901
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g04687 02 55923739 55930163 Tsu02g04687 02 55923739 55930163 ECH