Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g04683 ATGTACTCGGAGAATGAATCTACTACTAATTCTCATGCAAAGAAAAAAGCAAATCCAAACACTCACAAGAAAAAAACAGGAAGAAAGATATTCAAGGAAACAAGGCACCCAATTTATAGAGGAATTCGacaaagaaatggaaaaaaatggGTTTGTGAAATTCGTGAACCAAACAAGAAAAAATCAAGAATATGGCTTGGAACTTACCCTACACCTGAAATGGCAGCTATAGCATATGATATAGCTGTCCTAGCATTTAAGGGCACTTCAGCAATATTCAATTTTCCTAATtctatttctcttcttccaattttgaaatcaaCTTCAGCTAAAGATATAAGAGAAGCTACAAAGGCTTTCACAAACACTTCTTTTGTTAGAGATGAGACTAAGTCTTGTTTGGTGGAATGTAAGAGCCAAAAAAGTGTTTTTAAGAGTGATAATATTGAGATTATgaataatattgatgatgatgagtcTAAAACAATGTTTTTTGATGAAGAAGTTTTGTTTAATATGCcttgttttttaaataatatggCTGAGGGTTTGCTTATTACACCACCCTCTATGAAGAGTGAATTGGATTGGGACAATGTTGATTGTGAAATGGATTTGACATTGTGGgcatattaa 636 0.2862 MYSENESTTNSHAKKKANPNTHKKKTGRKIFKETRHPIYRGIRQRNGKKWVCEIREPNKKKSRIWLGTYPTPEMAAIAYDIAVLAFKGTSAIFNFPNSISLLPILKSTSAKDIREATKAFTNTSFVRDETKSCLVECKSQKSVFKSDNIEIMNNIDDDESKTMFFDEEVLFNMPCFLNNMAEGLLITPPSMKSELDWDNVDCEMDLTLWAY 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g04683 211 MobiDBLite consensus disorder prediction 1 30 - -
Tsu02g04683 211 Pfam AP2 domain 37 86 IPR001471 GO:0003700|GO:0006355
Tsu02g04683 211 Gene3D AP2/ERF domain 38 98 IPR036955 GO:0003700|GO:0006355
Tsu02g04683 211 PANTHER CBF/DREB1 TRANSCRIPTION FACTOR 7 210 - -
Tsu02g04683 211 MobiDBLite consensus disorder prediction 1 15 - -
Tsu02g04683 211 CDD AP2 37 98 IPR001471 GO:0003700|GO:0006355
Tsu02g04683 211 ProSiteProfiles AP2/ERF domain profile. 38 96 IPR001471 GO:0003700|GO:0006355
Tsu02g04683 211 SUPERFAMILY DNA-binding domain 38 98 IPR016177 GO:0003677
Tsu02g04683 211 SMART rav1_2 38 102 IPR001471 GO:0003700|GO:0006355
Tsu02g04683 211 MobiDBLite consensus disorder prediction 16 30 - -
Tsu02g04683 211 PRINTS Ethylene responsive element binding protein signature 39 50 IPR001471 GO:0003700|GO:0006355
Tsu02g04683 211 PRINTS Ethylene responsive element binding protein signature 62 78 IPR001471 GO:0003700|GO:0006355
Tsu02g04683 211 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 1D 7 210 IPR045277 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g04683 Tsu-Chr2 55884096 55884731 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g04683 23 211 AP2-EREBP Transcription Factor Family AT4G25490 46.032 4.68e-50 160
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Tsu02g04683 AP2 9.2e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g04683 - - gmx:100803317 237.269
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g04683 02 55884096 55884731 Tsu02g04683 02 55884096 55884731 ECH