Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g04681 ATGAGATTGGAGAAATGTTGGTTTTGTTCTTCAACTGTATATCCTGGACATGGAATTCAGTTTGTTCGTAATGATGCAAAGATTTTTCGGTTTTGTAGATCAAAATGCCACAAGAACTTCAAAATGAAGAGAAATCCCCGGAAAGTAAAATGGACCAAGGCATATAGGCGAGTTCATGGAAAGGATATGACACAgGATTCAACCTTTGAGTTTGAGAGAAAGCGAAACAGGCCTGAGAGATACGACAGGAATCTTGCTGAGAATGTACTCAAGGCAATTCCTAAGATTGATAAGATCAGAGTCAGTAGGGAGGAGAGACACCATAAAAACAGGATGAAAGGTAACAAGGAGAAAGACCGGAAGGAGGCAAAGAGGGAATTGGACACAAGCATCCATTTGGTCAAAGATCCTATCGCGTCACGAGATATCAAAGTCAATGTTACCCAACAACTACCAGAAGAGAATCCTCTCATGGAAGAGTGA 483 0.4079 MRLEKCWFCSSTVYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRVHGKDMTQDSTFEFERKRNRPERYDRNLAENVLKAIPKIDKIRVSREERHHKNRMKGNKEKDRKEAKRELDTSIHLVKDPIASRDIKVNVTQQLPEENPLMEE 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g04681 160 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 4 56 - -
Tsu02g04681 160 CDD Ribosomal_L24e_L24 1 54 IPR000988 -
Tsu02g04681 160 PANTHER BNAA04G10330D PROTEIN 1 148 - -
Tsu02g04681 160 PANTHER 60S RIBOSOMAL PROTEIN L24 1 148 IPR000988 -
Tsu02g04681 160 Pfam Ribosomal protein L24e 1 65 IPR000988 -
Tsu02g04681 160 SMART 4TRASH 6 44 IPR011017 -
Tsu02g04681 160 MobiDBLite consensus disorder prediction 101 128 - -
Tsu02g04681 160 Gene3D Ribosomal protein L24e 1 68 IPR038630 -
Tsu02g04681 160 ProSitePatterns Ribosomal protein L24e signature. 8 25 IPR023442 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g04681 1 160 Cytoplasmic Ribosomal Protein Gene Family AT2G44860 70.000 1.83e-81 236
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g04681 K02896 - gmx:100306000 278.87
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g04681 02 55859126 55861523 Tsu02g04681 02 55859126 55861523 ECH