Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g04650 ATGGCTTTAACTTTAACTTCTTCGCACTTTCGTTTTCAACCTTTTCTCACACGCACAAACTACGTCTTCTTCTCCGACTTTATCGAACATCAAGTCCACGATTCTATCACTCTTCTTCGCCGGAGTAAGATCTCTGTTAATTCACCGCCGGCGTTGAAGCCGGTGAAATGCAGTAGATCCACGGAGGAGAAGCAGTGGAATGATGCCGAAACCGTTGCATCGGATTCCGATGAAGCTGTGGATGATTCAATCAGTCAAGCTCCGAGCAGAACTTCTTCAATTGAGACTCAGAGGATTTCAACTACCTCTTCCGGCGATTCTCTTTCGCTTGGAATTCGAGAACCTGTTTATGAAGTAGTAGAAGTGAAATTAGATGGAACAGTATCGACTAGAAAAATCAACAGGAAACAATTATTGAAGTCAAGTGGTCTTCGTCCGCGGGATGTCCGAAGTGTGGATCCATCATTGTTTTTGACAAATTCAATGCCTTCTTTGTTGGTTCGTGAGTATGCTATACTTCTAAACCTGGGTTCACTACGAGCAATAGCAATGAAAGATTGTGTACTTATATTTGACTATAATCGtAAAGGAGGGCAAGCTTTTCTAGAGTCATTGCTGCCTCGGTTGAATCCCAAGAACAACAATGGAGGACCATCAATGCCATTTGAAATCGAGGTTGTCGAAGCAGCATTGCTTTCAAGAATACAACGTTTGGAGCGGAGACTGATGGACTTAGAACCTCGTGTTCAAGCTCTTCTTGAGGCCTTGCCAAATCGGATAACTGGGGACATATTGGAGCAACTTCGTATTAGCAAACAAACTTTGGTTGAGTTAGGTTCGAGGGCAGGAGCTCTCAGACAGATGCTGCTAGACCTTCTGGAGGACCCAAATGAAATACGGAGGATATGTATTATGGGAAGAAATTGTACACTTAATAAAGGAAACAATAATGTGGAATGCTCAGTTCCCTTAGAAAAGCAGGTTGCCGATGAAGAGGAGGAGGAAATTGAGATGCTTCTGGAAAATTATCTCCAAAGATGTGAATCTTGTCATGGTCAAGCTGAAAGGCTTCTTGATTCTGCAAGGGAAATGGAAGATTCTATAGCTGTCAGCTTGAGgtttgaatttcatttttctctcttcgGCCAGGGGGGTTTAGAGTTGTATCAAGTGATCGTGGATTACTGCGTTGAAAGAATCACATGA 1206 0.4212 MALTLTSSHFRFQPFLTRTNYVFFSDFIEHQVHDSITLLRRSKISVNSPPALKPVKCSRSTEEKQWNDAETVASDSDEAVDDSISQAPSRTSSIETQRISTTSSGDSLSLGIREPVYEVVEVKLDGTVSTRKINRKQLLKSSGLRPRDVRSVDPSLFLTNSMPSLLVREYAILLNLGSLRAIAMKDCVLIFDYNRKGGQAFLESLLPRLNPKNNNGGPSMPFEIEVVEAALLSRIQRLERRLMDLEPRVQALLEALPNRITGDILEQLRISKQTLVELGSRAGALRQMLLDLLEDPNEIRRICIMGRNCTLNKGNNNVECSVPLEKQVADEEEEEIEMLLENYLQRCESCHGQAERLLDSAREMEDSIAVSLRFEFHFSLFGQGGLELYQVIVDYCVERIT 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g04650 401 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 51 372 IPR039204 -
Tsu02g04650 401 MobiDBLite consensus disorder prediction 50 98 - -
Tsu02g04650 401 PANTHER MG2+ TRANSPORTER PROTEIN, CORA-LIKE/ZINC TRANSPORT PROTEIN ZNTB-RELATED 51 372 - -
Tsu02g04650 401 MobiDBLite consensus disorder prediction 57 71 - -
Tsu02g04650 401 Coils Coil 235 255 - -
Tsu02g04650 401 MobiDBLite consensus disorder prediction 78 98 - -
Tsu02g04650 401 Coils Coil 326 346 - -
Tsu02g04650 401 Gene3D Magnesium transport protein CorA, transmembrane region 194 374 - -
Tsu02g04650 401 Gene3D - 113 193 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g04650 110 372 MRS2 Gene Family AT5G22830 82.129 7.55e-148 425
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g04650 K16075 - gmx:100808371 547.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g04650 02 55502479 55509759 Tsu02g04650 02 55502479 55509759 ECH