Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g04642 ATGATGCACGTGCCTTGGTTGCAAAATTTGTTGGCAATTACTACATTTTTTACAACTTGCGAAACTCATTCAAACGATCCCAAAAATGAGTGTAACAAGTTTTGCATCGATTGCATTGACAATCCATTATGCGGATCTTGTATAAGATCTGATCACAAAGATCACAACGTAATTCAAataAGGAGGTCATCATATAATGAAGTAGTTAAGACTACTGAAATTTACAAGCATGTGGACatccttggaattcaaacctaTGTGATCAATAGCTCTCCAGTTGTATTCTTAAACAAGAGGATTCGACCACATCCTAAGAGGAACAATATTGGTAAAATTGGTCACATTAGCAACTCTCTCTGTAAGATATGTGATAGAAATCTTGTGGATTCTTCTTGCTTTTGCTCTTTAGCATGTAAG 417 0.3381 MMHVPWLQNLLAITTFFTTCETHSNDPKNECNKFCIDCIDNPLCGSCIRSDHKDHNVIQIRRSSYNEVVKTTEIYKHVDILGIQTYVINSSPVVFLNKRIRPHPKRNNIGKIGHISNSLCKICDRNLVDSSCFCSLACK 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g04642 139 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 1 139 - -
Tsu02g04642 139 Pfam PLATZ transcription factor 61 139 IPR006734 -
Tsu02g04642 139 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 1 139 - -
Tsu02g04642 139 SUPERFAMILY B-box zinc-binding domain 18 67 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g04642 Tsu-Chr2 55440822 55441417 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Tsu02g04642 PLATZ 2.6e-23 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g04642 - - mtr:MTR_2g060540 234.958