Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g04611 atGGCGGAGAGAATTTGCATATCTAGCGAAGACATCAAGATTGAAGAAAGCGGCGATATTGGAGAAAAACCCTCTTTACTAGGTCGAAGAAAACGTTTGTTTTTTGACTTAAACGAAGAAGCTGTAGATGATATTGGAAATGAAGATGATAAGATACTAATAAGTGACGGCCTTTGTGGTGAGATAAGTAACAACAATGAGATATCATCACAATCACAAGAAGAGAATTTGAGTAGCAATAATAATTCAAGTGAAGAAGGGAAAGGGCGTGGAAGTACGGTAAGACAATATGTGAGGTCCAAAATGCCTAGGCTTCGTTGGACTCCCGATCTTCATTTATCTTTTGTGCATGCTGTTGAGAGGCTTGGAGGGCAAGAAAGAGCAACACCCAAGTTGGTTCTCCAGTTGATGAATGTAAGAGGACTTAGCATTGCACATGTGAAGAGTCATTTGCAGATGTATCGGAGTAAAAAGCTTGATGAGTCTGGCCAAgTTTTATCCCAAAAAAATAGGGCAATGCAAGGAAGGAATCATCACATTTTGGATATGTATGGAAGATTTAATGTCCAAGGACAATTTGGTGTTAATAGCAACTATTTGCAACCATCGTCTCAACTAATGAAACAACCATATAATGAAATCAAAGCTCATCCCACTTCAAGGTTTCATGAGAATGGTGTTTTCAATAATAATCACGTGATCTTAAGATCAAGTTCAATATGGGACAAAGATTTATATAAGACAAGTTCACATATATTTGATGTAAAGGATGCAATAACAAGAAATAATGGACCTATTAATTCTAGCAAAATATTTCAATTGGTACCTGAAGAAAAGAAGTGGCCACCACAAGgaaatgaaaatcaaaaggAATTTATAAGCTTGTCTCGTGATGACCAACATTTTCCATGGAGCTCCTATTCTAGTCCTATATTTACTAAGGCACATGATAAAAAAGATGGAATGCAAGAATTCATACACCAAACTCAAGTATTGAAGCAAGGTCATGTCACAGTCCAATTAAAAAGGTTGAATGAGAATAAAGAGTACTCACCAAGTTTCTTAGAGTTAAAGCTAAGTCGAGACTCAGAAATCAATGTTAAGGATCAAACGAATATCGACCCAAAAGGCGAACAAGAAGCGCATAcaattctctctctttctttgttCTCTTCCTCACCGGTCTCGAATTCAAGGTGA 1200 0.3592 MAERICISSEDIKIEESGDIGEKPSLLGRRKRLFFDLNEEAVDDIGNEDDKILISDGLCGEISNNNEISSQSQEENLSSNNNSSEEGKGRGSTVRQYVRSKMPRLRWTPDLHLSFVHAVERLGGQERATPKLVLQLMNVRGLSIAHVKSHLQMYRSKKLDESGQVLSQKNRAMQGRNHHILDMYGRFNVQGQFGVNSNYLQPSSQLMKQPYNEIKAHPTSRFHENGVFNNNHVILRSSSIWDKDLYKTSSHIFDVKDAITRNNGPINSSKIFQLVPEEKKWPPQGNENQKEFISLSRDDQHFPWSSYSSPIFTKAHDKKDGMQEFIHQTQVLKQGHVTVQLKRLNENKEYSPSFLELKLSRDSEINVKDQTNIDPKGEQEAHTILSLSLFSSSPVSNSR 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g04611 399 MobiDBLite consensus disorder prediction 64 90 - -
Tsu02g04611 399 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 64 389 IPR044848 GO:0003700
Tsu02g04611 399 Pfam Myb-like DNA-binding domain 105 155 IPR001005 -
Tsu02g04611 399 Gene3D - 102 159 - -
Tsu02g04611 399 PANTHER MYB-LIKE HTH TRANSCRIPTIONAL REGULATOR FAMILY PROTEIN 64 389 - -
Tsu02g04611 399 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 99 159 IPR017930 -
Tsu02g04611 399 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 103 158 IPR006447 GO:0003677
Tsu02g04611 399 SUPERFAMILY Homeodomain-like 101 157 IPR009057 -
Tsu02g04611 399 MobiDBLite consensus disorder prediction 64 94 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g04611 Tsu-Chr2 55072073 55075522 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g04611 94 247 G2-like Transcription Factor Family AT2G42660 48.718 1.61e-35 129
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Tsu02g04611 Myb_DNA-binding 1e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g04611 - - mtr:MTR_2g084230 437.573
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g04611 02 55072073 55075522 Tsu02g04611 02 55072073 55075522 ECH