Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g04607 atgGTGGAAGATGAAGATTACAGAAGAAAAGCCAAGATTGCAGTTGTAGCAATTATTGTACTTGCTTCTCTTGCTGTTTTTGCTTCTTTTGTTGCCTTTGCTTACTATTGCTACATCAGTAACAAAGTTTCCAAGCGTAGGCGCAAAAGCCATAAAGTTGAAGATGCCAACGTTAATGAGAAAAGTGACTTTGCAAACCTGCAAGTTGTTGCCGAGAAAGGACTTCGAGTGTTCACTTTCAAGCAACTACATTCTGCAACCGGAGGATTCAGCAAGTCAAATGTGGTTGGTCATGGTGGATTTGGACTTGTTTACCGTGGAGTTCTCAATGATGGAAGGAAGGTTGCGATTAAATTAATGGATCAGGCTGGAAAGCAAGGAGAAGAAGAGTTTAAAGTCGAGGTGGAATTGCTAAGTCGGTTGCATTCTCCGTATTTGCTTGCATTGCTTGGATACTGCTCTGATCATAATCATAAGCTGCTGGTGTATGAATTTATGGCGAATGGTGGCCTTCACGAACATCTTTATCCTATCAGCAATAACAATTCAAGTGTTGTGTCCGTTAATCTAGATTGGGAAACTCGATTAAGAATAGCACTTGAAGCTGCTAAGGGTTTGGAATATCTTCATGAACATGTCAGTCCTCCTGTGATTCACAGAGATTTTAAGAGCAGCAACATCCTCTTGGACAAAAAATTTCATGCTAAAGTTTCTGATTTTGGATTGGCAAAGCTTGGATCTGATAGAGTCGGTGGACATGTTTCAACTCGTGTTTTAGGCACCCAGGGATACGTTGCCCCCGAATATGCACTAACGGGGCATTTAACAACAAAATCAGACGTGTACAGTTATGGTGTCGTACTTTTGGAGCTTCTAACCGGCCGAGTGCCAGTTGATATGAAGAGACCTCCGGGAGAAGGCGTACTCGTTACTTGGGCTTTGCCACTTTTGACTGATAGAGAAAAGGTTGTAAAGATTATGGATCCATCATTGGAGGGACAGTACTCAATGAAAGATGTTATCCAAATAGCGGCCATTGCGACAATGTGTGTGCAACCAGAAGCAGATTATAGGCCTCTCATGGCTGATGTTGTGCAGTCTTTGGTTCCATTGGTGAAGACTCAAAGATCCAACTCAAAACCAGGCAGCTGCTCTAGTTTCAATTCCCCCAAGTTGTCTCCTGGCCCTGCTAATCATCTAGTTAATGCAAATATGTAA 1218 0.4228 MVEDEDYRRKAKIAVVAIIVLASLAVFASFVAFAYYCYISNKVSKRRRKSHKVEDANVNEKSDFANLQVVAEKGLRVFTFKQLHSATGGFSKSNVVGHGGFGLVYRGVLNDGRKVAIKLMDQAGKQGEEEFKVEVELLSRLHSPYLLALLGYCSDHNHKLLVYEFMANGGLHEHLYPISNNNSSVVSVNLDWETRLRIALEAAKGLEYLHEHVSPPVIHRDFKSSNILLDKKFHAKVSDFGLAKLGSDRVGGHVSTRVLGTQGYVAPEYALTGHLTTKSDVYSYGVVLLELLTGRVPVDMKRPPGEGVLVTWALPLLTDREKVVKIMDPSLEGQYSMKDVIQIAAIATMCVQPEADYRPLMADVVQSLVPLVKTQRSNSKPGSCSSFNSPKLSPGPANHLVNANM 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g04607 405 ProSitePatterns Protein kinases ATP-binding region signature. 96 118 IPR017441 GO:0005524
Tsu02g04607 405 ProSiteProfiles Protein kinase domain profile. 90 372 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g04607 405 SUPERFAMILY Protein kinase-like (PK-like) 72 368 IPR011009 -
Tsu02g04607 405 ProSitePatterns Serine/Threonine protein kinases active-site signature. 217 229 IPR008271 GO:0004672|GO:0006468
Tsu02g04607 405 Gene3D Transferase(Phosphotransferase) domain 1 166 386 - -
Tsu02g04607 405 Pfam Protein kinase domain 91 302 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g04607 405 PANTHER OS01G0750732 PROTEIN 4 391 - -
Tsu02g04607 405 CDD STKc_IRAK 96 371 - -
Tsu02g04607 405 MobiDBLite consensus disorder prediction 375 405 - -
Tsu02g04607 405 Gene3D Phosphorylase Kinase; domain 1 49 165 - -
Tsu02g04607 405 PANTHER OS07G0227300 PROTEIN 4 391 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g04607 Tsu-Chr2 55010422 55013584 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g04607 1 394 Receptor kinase-like Gene Family AT3G58690 77.215 0.0 613
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Tsu02g04607 Pkinase 3.2e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g04607 - - gsj:114372917 667.922
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g04607 02 55010422 55013584 Tsu02g04607 02 55010422 55013584 ECH