Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g04602 ATGGCTGAACGTGTTGTTGGGACGGGATCATTTGGGATTGTTTTCCAGGCAAAGTGCTTGGAAACTGGTGAGGCAGTGGCTATAAAGAAGGTTTTGCAAGATAAGCGGTACAAAAATCGTGAACTGCAGTTAATGCGTGTATTGGATCACCCAAATGTAATTTCCTTGAAGCACTGTTTCTTCTCTACAACAAGCAGAGATGAACTTTTTCTTAACTTGGTCATGGAATATGTCCCTGAGACGATGTACCGAGTTCTAAAGCACTACAATAATATCAACCAAAGAATGCCCTTAATCTATGTGAAATTATATACATACCAAATATTCAGAGGACTAGCATATATCCATACTGTTCCAGGAGTTTGCCATAGGGATGTGAAGCCCCAAAATCTATTGGTCGATCCTCTCACTCACCAAGTTAAGCTTTGCGATTTTGGGAGTGCAAAAGTTCTGGTCAAGGGTGAAGCGAACATTTCATACATATGTTCACGGTACTATCGGGCCCCAGAACTAATATTCGGTGCGACAGAATACACAACTTCTATTGATATATGGTCAGCTGGTTGTGTCCTTGCAGAACTTCTTCTAGGCCAGCCACTATTCCCAGGAGAGAATCAGGTGGACCAACTTGTGGAAATTATTAAGGTTCTTGGTACTCCAACTCGAGAAGAAATTCGTTGTATGAACCCTAATTATTCCGATTTTAGATTCCCCCAGATTAAAGCTCATCCTTGGCACAAGGTTTTTCACAAGCGCATGCCTCCTGAAGCAATTGACCTTGCATCAAGGCTTCTTCAATACTCACCAAGTCTTCGTTGCAGTGCACTGGAAGCATGTGCGCATCCTTTCTTTGATGAGCTTCGAGAGTCCAATGCTCGGCTTCCTAATGGTCGTCCTCTGCCTCCTCTTTTCAACTTTAAACAGGAATTATCTGGAGCATCCCCTGAGCTGATCAATAAACTAATCCCAGAGCATGTCAGGCGGCAAACTGGTCTCGGCTTTTCCCATATCCCGGCTAGCACATAA 1026 0.4337 MAERVVGTGSFGIVFQAKCLETGEAVAIKKVLQDKRYKNRELQLMRVLDHPNVISLKHCFFSTTSRDELFLNLVMEYVPETMYRVLKHYNNINQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENQVDQLVEIIKVLGTPTREEIRCMNPNYSDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCSALEACAHPFFDELRESNARLPNGRPLPPLFNFKQELSGASPELINKLIPEHVRRQTGLGFSHIPAST 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g04602 341 Gene3D Phosphorylase Kinase; domain 1 1 79 - -
Tsu02g04602 341 ProSitePatterns Protein kinases ATP-binding region signature. 6 30 IPR017441 GO:0005524
Tsu02g04602 341 ProSitePatterns Serine/Threonine protein kinases active-site signature. 121 133 IPR008271 GO:0004672|GO:0006468
Tsu02g04602 341 Pfam Protein kinase domain 3 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g04602 341 ProSiteProfiles Protein kinase domain profile. 1 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g04602 341 SUPERFAMILY Protein kinase-like (PK-like) 3 309 IPR011009 -
Tsu02g04602 341 PANTHER SHAGGY-RELATED PROTEIN KINASE ETA-LIKE 1 333 - -
Tsu02g04602 341 CDD STKc_GSK3 3 287 IPR039192 -
Tsu02g04602 341 Gene3D Transferase(Phosphotransferase) domain 1 80 327 - -
Tsu02g04602 341 SMART serkin_6 1 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g04602 341 PANTHER GLYCOGEN SYNTHASE KINASE-3 ALPHA 1 333 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g04602 Tsu-Chr2 54936853 54941621 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g04602 4 322 MAP Kinase Gene Family AT3G59790 34.848 4.61e-59 193
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_GSK Tsu02g04602 Pkinase 1.9e-63 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g04602 K14502 - qsu:111995841 666.766
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g04602 02 54936853 54941621 Tsu02g04602 02 54936853 54941621 ECH