Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g04573 ATGCAACGTGCAAGTGATCTTCTTCTTGGAGTCTCAATATTTGGTGAACCAATCAAGTCTAAAATCATTGATCGTGCAAATTCAGCTATGGAAGAATTGTGCAAGTTAGGAACTGCTGCTGGAAAACCTATGTGGCATCAACATGAAGATAGCTATGAAGTTCTTGATAATACCGAATATTTGAAAGAATTTCGCCGGGTTGATTCGACGTTAATGGATATCATTAGGTTGGCTGAGGTTGGAGAACTGCAAGCTTTACCTAGTTTTGATTCGTGCCAAAATATGAATCCAATGTCGACAAATCAAAATTTGGGACAAGGTTTGCAGATCGAAGCTACACGCGCTATGCAAATGCTTAACTTGAGTCCAATTAATGTTGTTGAATTACTTATGGATGTGAATCAATGGTCGACGACATTTCACAACATTGTCTCAAGAGCAACGGTTCTAGGAAGCTTTTCAGATGGAGTGGAAGGAACCTATGATGGAAAATTGCACGTGATGACTGCAGAATTTCATTTACCTAGTCCTGTTATACCTACTAGGGAGTGTTGTTTTGCAAGGTACTGCAAGAAATTCCCTTATGATAGATGGGCTATTGTTGATGTATCTTTGGAAGACTTCTTTCCTTCTCCAACAAGCAATCTTCGGAAAAAACCTTCAGGATGTGTCATTGTACCAAGGGAACATGCAACCATCCAGGTTATATGGGTGGAGCATGTGGAAGCAGACCATAGTCAAGTGAATGATCTTTTCAAGCCATTAGTTACCTCTGGTTTGTCTTTTGGTGCATCGCGTTGGGTTTCTTCAATCATCCGGCACTTTGAGTGGTCAGAAGTACTGAAGACTACAATGCTTGCTGCAGATGCTGGAGTTCTTATACCTCAAAATGGAAGGACAAGTTTCTTGAAGTTAGCAGATAGAATGATGAGAAAATTTTGTGCTAATCTTAGTGCTACAACTAGCAATCCATGGATGAGATTGGCTCCTTCTAATTCAGTAGATGTTAGAGTTATGATTGATAATAATACAAATAATCCTCTTGGAACATCAGTGGTTTTTAGTGCTACTATTTGGTTTAATATCAATCCAAATCGATTATTCAACTTCCTTCGTCACGAGAAATCCAGAAACGTGTGGGATATACtttcaaaaacactttttattCGAGAATTTGCTTGCTTGATGACCAGCAAACATCCGGAGAATCGTGTTTCTTTGCTACGAGCAAGTGATTCTAAGGATAAGACAGAAATCTTTTACCTACAAGAGAGTTATGCAGACTCATCAGTTTCCTACGTGATTTACGCTCCACTAGATGAATCGGCATTGGCATATCTTGCAAAAGGATCAAATCCAGACAATGTAATTGCATATCCATCAGGATTTGCTATTATCCCAGGAGGGTTAGACAGAAATGGTTATCAAAGCAATGGCAATGAAAGTCTTCTAACTGTTTCATTTCATATCCTCGATAAAGCCATTACCAATGTTGCAGGTATTCCTCCTGAATCAGTTCAAACAATTTATGGGATCATTACAGAAACTGTTAATGCTATAAAGGATGCTTTGTCGTATCATACTCTACACGACAATTGGGCGCAAGATGAACTGAAAAATGGcttgacaacaaaaaatttTAGCGTGTAG 1650 0.383 MQRASDLLLGVSIFGEPIKSKIIDRANSAMEELCKLGTAAGKPMWHQHEDSYEVLDNTEYLKEFRRVDSTLMDIIRLAEVGELQALPSFDSCQNMNPMSTNQNLGQGLQIEATRAMQMLNLSPINVVELLMDVNQWSTTFHNIVSRATVLGSFSDGVEGTYDGKLHVMTAEFHLPSPVIPTRECCFARYCKKFPYDRWAIVDVSLEDFFPSPTSNLRKKPSGCVIVPREHATIQVIWVEHVEADHSQVNDLFKPLVTSGLSFGASRWVSSIIRHFEWSEVLKTTMLAADAGVLIPQNGRTSFLKLADRMMRKFCANLSATTSNPWMRLAPSNSVDVRVMIDNNTNNPLGTSVVFSATIWFNINPNRLFNFLRHEKSRNVWDILSKTLFIREFACLMTSKHPENRVSLLRASDSKDKTEIFYLQESYADSSVSYVIYAPLDESALAYLAKGSNPDNVIAYPSGFAIIPGGLDRNGYQSNGNESLLTVSFHILDKAITNVAGIPPESVQTIYGIITETVNAIKDALSYHTLHDNWAQDELKNGLTTKNFSV 549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g04573 549 Pfam START domain 102 270 IPR002913 GO:0008289
Tsu02g04573 549 SUPERFAMILY Bet v1-like 299 469 - -
Tsu02g04573 549 ProSiteProfiles START domain profile. 15 280 IPR002913 GO:0008289
Tsu02g04573 549 CDD START_ArGLABRA2_like 19 276 - -
Tsu02g04573 549 Gene3D - 93 266 IPR023393 -
Tsu02g04573 549 SUPERFAMILY Bet v1-like 106 276 - -
Tsu02g04573 549 SMART START_1 67 277 IPR002913 GO:0008289
Tsu02g04573 549 PANTHER HOMEOBOX LEUCINE ZIPPER PROTEIN ROC2 2 528 - -
Tsu02g04573 549 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 2 528 IPR042160 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g04573 Tsu-Chr2 54761894 54766356 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g04573 1 525 Homeobox Transcription Factor Family AT4G04890 39.852 8.32e-116 358
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g04573 K09338 - jre:108992281 473.011
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g04573 02 54761894 54766356 Tsu02g04573 02 54761894 54766356 ECH