Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g04569 ATGGCAACCATAGTTCAATATACATTGGCCTTGTTTTGTCTCTTGGTGTTGATGCAAAAAGGTGATGCCTATGAATTTGTAGTTGGAGGCCAAAATGGTTGGAGTGTTCCAAGTGACCCTAATGCCAACCCTTACAATCAATGGGCAGAAAAGAGCAGATTTCAAGTAGGAGACTCCCTAGTGTTCAATTACCAATCAGGCCAAGATTCAATAATTCAAGTAAACAGCCAAAAAGACTATGAAAATTGCAACACTGATGGATCATCTTCTGCAAAAGCCTCTGATGGCCACACAGTAATCAAACTAAATAAATCAGGACCTCACTACTTCATAAGTGGAAACAAAAACAACTGTCTCAAGAATGAGAAGTTATTGGTGATTGTACTTGCTGACAGAACCAACAAAAACTCAAACACAAACCAAACAACCACTCCTCCTTCTCCTTCACCATCTGTTTCTGTTTCTCCTTCTCCTTCTCCATTATCTTCACGCTCATCAGATGCATTAGCTCCTACACCACCACCTTCTCAGCTAGAGGGTTCATCTCCACCACCTGTTCAACAAGTAGGTTTAACTCCACCACCTGTTCAGCAAGTAGGTTCATCTCCACCACTAGGGACTGATGTGACAAATCCAATTACTCCAACTCAAGCTCCTGTTAGTGaacctcctcctcctccttctcGTAATACTGCTTCTTCAAtcttggttagctttggttgtTCTGTTGGAGCACTCATGCTTTCAGTTCTGGTTTTTTCCAAGTGA 768 0.3932 MATIVQYTLALFCLLVLMQKGDAYEFVVGGQNGWSVPSDPNANPYNQWAEKSRFQVGDSLVFNYQSGQDSIIQVNSQKDYENCNTDGSSSAKASDGHTVIKLNKSGPHYFISGNKNNCLKNEKLLVIVLADRTNKNSNTNQTTTPPSPSPSVSVSPSPSPLSSRSSDALAPTPPPSQLEGSSPPPVQQVGLTPPPVQQVGSSPPLGTDVTNPITPTQAPVSEPPPPPSRNTASSILVSFGCSVGALMLSVLVFSK 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g04569 255 MobiDBLite consensus disorder prediction 192 216 - -
Tsu02g04569 255 Pfam Plastocyanin-like domain 34 120 IPR003245 GO:0009055
Tsu02g04569 255 MobiDBLite consensus disorder prediction 156 172 - -
Tsu02g04569 255 ProSiteProfiles Phytocyanin domain profile. 24 130 IPR003245 GO:0009055
Tsu02g04569 255 PANTHER BLUE COPPER PROTEIN 8 150 IPR039391 GO:0009055
Tsu02g04569 255 MobiDBLite consensus disorder prediction 135 233 - -
Tsu02g04569 255 MobiDBLite consensus disorder prediction 176 191 - -
Tsu02g04569 255 PANTHER PLASTOCYANIN-LIKE DOMAIN PROTEIN 8 150 - -
Tsu02g04569 255 SUPERFAMILY Cupredoxins 23 130 IPR008972 -
Tsu02g04569 255 Gene3D - 22 131 IPR008972 -
Tsu02g04569 255 CDD OsENODL1_like 24 129 IPR041846 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g04569 Tsu-Chr2 54713970 54715908 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g04569 9 177 Phytocyanin Superfamily AT3G20570 52.663 1.79e-49 160
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g04569 - - gmx:100788637 249.595
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g04569 02 54713970 54715908 Tsu02g04569 02 54713970 54715908 ECH