Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g04565 ATGAAATTGTTTAAGGAAGTAAAAACTTCCTCATACCAAACATTTCTcttgttattattgttgtttgtCTTGTCcagttttaaaatttgtcacGGACAAGACGATGACCTTGCGGCGCCTCCACCACCACCGGCTGAACTCGAAAACTGCAACGGAATATTTCTAACCTACAGTTTAACATCAAGGGAAAAAGAATATCCGCATGTGAAAAATGTGACAGCACAGGCATGGGCGTTTAAAGCGGAAGCTTCATTGATGAATGCTGGTGATGAGGAATTGAAAGGTTGGAAAATGTTTATTGGGTTTCAGCATAGGGAGATTCTTGTTTCGGCTGACGGGGCTGTTCCGGTTGACTCGGATGATTTCCCGGCTGAGGTAGGAAATGGGACTACACTTGCTGGGAGTGCTGCGACGGATTTGAGGACTGCAATTGAAACGGCTGGTGATTATACTCAAATGGCTGTTATTGTTCAGTTGAGTGGAACTCAGTTTGGACTTGGTGCAGGTGGTAAACCTATGCCTAAAACTATTAAGCTTGTTAATGATGGCTTCAAATGTCCCCAACCTAGTCACAAagGTACAAGAATGTTTGTATGCTGCAAAAAGGACCCAAAATACAAAGTCAAACTTGACAAGAAAACAAAGTTCCTTCCTCGTCGCTATGGCGACCTAACCATAGCATATGACGTACTTCAATCCTTCAAAACCAGCTACTTCGCACAAATAACCATAGATAACAATCATCCATTAGGTCGTCTCGATCATTGGAACTTAACATGGGAATGGCAAAAAGGCGAGTTCATTAACACATTAAAAGGTGCTTTCGCTCGCATAAAAGACCCTTCTGAATGTTTATATAGTCCTGCTGGAAGATACTATGGTGACTTAGATTTCTCACAAGTTGCAAACTGTCAAAAAAAGCCTATTCTCTCTGATCTTCCTTCtgaaagaaaagaagatgaaaaagtTGGTAAATTACCTTGGTGTTGTAAGAATGGTACTGTTTTACCACCTATTATGGATAAGAACAAAGCAAGATCACTTTTTCAGATGCAGGTTTTTAAAATCCCACCTGATGATAACAGAACAGCAATTACACCACCAGCGAAATGGCACATTGATGGTGTTATTAACCCTAAATACACATGTGGACCACCAATTAGGGTTGATCCACAAGAGTTTCCTGATCCAAGTGGACTTAAAGCAATCTCAACAGCTTTTGCCAGTTGGCAAATAGTTTGCAATATGACAAAACCGAAGCCGAAAGAAAACCGTTGTTGTGTTTCGTTCTCGGCTTTCTATAATGAATCTGCTATCCCTTGCAACACATGTGCCTGTGGTTGTGATGATACAAGAAAGTGTAATGCCAATGCTCAACCTTTACTTCTTCCACCTGATGCACTTCTTGTCCCTTTTGTGAATAGAACATTAAAGGCGCGCGCGTGGGCGAAACTCAAACACATGCGTGTTCCGACTAAGTTACCTTGTGGAGATAATTGTCCTGTGAGTATTAACTGGCATGTTAGTTCTGATCATAAGGAAGGATGGACGGCTAGGATGACAATTTTCAATTGGGAAGATTTCTCTTTTGATGATTGGTTCACTGCAATCAAGTTTGATAGGTCTTTTGAAGATTTTCAAGATGTTTACTCGTTTAATGGAACGAGAATCCCCGGTATCAAAACCATTTTCTTTGAAGGACTTAAAGGTTTGAATTACTTAGCAGGAGAGACTAATGGAAGTCATCTTGGCGATCCAAGGGTGCCGGGGAAACAACAGTCTGTGATTTCTTTTCATAAGAAACACATAAAAGATTTCAAAGTTGAGCGCGACGCTTTTCCTTCTAAGGTTTACTTCAATGGAATGGAATGTGCTCTTCCTCCACATAGACCTGCTAAAAGTTTAGGGTATAAATCTTCTATCAGTGTCGTTACTGTCATTTTCACAGCTTTTATGACATTCTTGCTCATGACAGATCGCTTTTTCTGA 1989 0.3957 MKLFKEVKTSSYQTFLLLLLLFVLSSFKICHGQDDDLAAPPPPPAELENCNGIFLTYSLTSREKEYPHVKNVTAQAWAFKAEASLMNAGDEELKGWKMFIGFQHREILVSADGAVPVDSDDFPAEVGNGTTLAGSAATDLRTAIETAGDYTQMAVIVQLSGTQFGLGAGGKPMPKTIKLVNDGFKCPQPSHKGTRMFVCCKKDPKYKVKLDKKTKFLPRRYGDLTIAYDVLQSFKTSYFAQITIDNNHPLGRLDHWNLTWEWQKGEFINTLKGAFARIKDPSECLYSPAGRYYGDLDFSQVANCQKKPILSDLPSERKEDEKVGKLPWCCKNGTVLPPIMDKNKARSLFQMQVFKIPPDDNRTAITPPAKWHIDGVINPKYTCGPPIRVDPQEFPDPSGLKAISTAFASWQIVCNMTKPKPKENRCCVSFSAFYNESAIPCNTCACGCDDTRKCNANAQPLLLPPDALLVPFVNRTLKARAWAKLKHMRVPTKLPCGDNCPVSINWHVSSDHKEGWTARMTIFNWEDFSFDDWFTAIKFDRSFEDFQDVYSFNGTRIPGIKTIFFEGLKGLNYLAGETNGSHLGDPRVPGKQQSVISFHKKHIKDFKVERDAFPSKVYFNGMECALPPHRPAKSLGYKSSISVVTVIFTAFMTFLLMTDRFF 662
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g04565 662 PANTHER COBRA-LIKE PROTEIN 7 13 661 - -
Tsu02g04565 662 Pfam COBRA-like protein 238 417 IPR006918 GO:0010215|GO:0031225
Tsu02g04565 662 PANTHER COBRA-LIKE PROTEIN 10 13 661 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g04565 Tsu-Chr2 54691532 54694325 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g04565 15 659 COBRA Gene Family AT3G20580 61.854 0.0 837
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g04565 - - gmx:100789175 1046.57
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g04565 02 54691532 54694325 Tsu02g04565 02 54691532 54694325 ECH