Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g04544 atggttGGAACTCCAATGAATGGAAGAAGACTCTCTTTTGGATTTGGAAATGGTGGACATGATCTTGGTCCAAGTAGTACTCCACCAAGCAATGCTGGTTCTGATTATGGAAGCTTTATAGATTTCACAAGAGAAGATGTTGAGGCTTTGCTTAATGAGAAATCTAAAAGAAAAGACAGATTTAATTACAAGGAAAGATGTGAAAATATGATTGATTATATAAAAAGGCTTAAAGTTTGCATTAGATGGTTTCAAGACCTTGAGTTGAGCTACTCATTAGAGCAAGAGAAATTGAAGAGTTCATTGGAGTTATCCCAACAAAAATGCATGGAAATAGAGTTGTTGCTCAAAATCAAGGAAGAAGAATTGAATTCAATTATTACAGAAATGAGAAGGAATTGCGCTTCTTTGCAAGAGAAGTTAGTGAAGGAAGAAACAGATAAATCGGCTGCGATGGAATCTCTTGTTAAAGAGAGAGAGGCTAGGCTTGACTTTGAAAGGTCACAAACTACACTATCAGAAGATCTCGGTAGAGCTCAACGAGAGCTTGAAACTGCGAATCAGAAGATATCATCGCTCAATGAGATGTATAAGCGGTTACAAGAGTATATAACAAGCTTACAGCAGTACAATGGAAAACTTCATTCTGAGCTGTCAACAGTTGAAGGCGAACTCAAACGTGTCGAGAAAGAGAAAGCAACCGTAGTGGAAAACCTTACATTGTTAAAGGGCCAACTTGCTTTGTCAACTGCTTCTCAAGAAGAGGCTATAAAACAGAAAGATGCTTTTGCTAGTGAAGTTACATCCCTTCGAGGTGAGTTGCAACAAGTGAGGGACGATCGAGACCGCCAAATATCTCAAGTGCAAACTTTAAGTACTGAAATAGTGAAGTTTAAAGATTCTTCAGAAAAGTCCGGTTCCGAACTGAACAACTTGACTGTGAAAACACATGAATTAGAGACAAAATGTACTTTGCAAGATAGTCATATAAAGGAATTACAAGAGAAGTTAACGATTGCAGAGAACAAATTGGAGGTTTGTGATATATCTGCAATCGAGACAAAAACAGAATTCGAAGGGCAACAAAAACTCGTAAATGAGTTAGAAAAACGATTGGCAGATGCAGAATACAAACTTATAGAAGGGGAGAAGCTGAGGAAAGAATTACATAATACCATTTTGGAACTGAAAGGGAACATTCGTGTGTTCTGTAGAGTACGGCCTTTGTTACCTGATGAAAGTTGCAGTCCAGAAGGCAAGATTATATCTTATCCCTCTTCGATGGAAGCTGCTGGACGAGGCATTGAATTGGCACAAAATGGCCAAAAACATTCTTTTACATTTGATAGAGTGTTTGCACCTGATGCATCTCAACAAGAAGTTTTTACAGAAATTTCACAACTTGTGCAAAGTGCTCTTGATGGTTATAAGGTTTGCATTTTCGCATATGGTCAGACAGGTTCGGGGAAAACCTATACGATGATGGGCAGGCCTGGACATCCAGGAGAAAAGGGCTTAATACCTCGTTCGCTAGAACAAATATTTCAAACAAGACAGTCTCAGCAACCACAAGGATGGAAATATGAAATGCAGgtgtCAATGTTGGAAATATACAATGAAACGATCCGTGATTTGTTGTCTACGAATAAGTCCTCATCAGATGCGACTCGTGTAGACAATGGTACTCCTGGGAAACAATATACAATCAAACATGATGCGAATGGAAATACACATGTTTCTGATCTTACAGTGGTGGATGTTCAAAGTGTAAAAGAGGTCGCATTCCTTTTAAATCAAGCGGCAAACAGCAGATCTGTGGGAAAAACTCAGATGAATGAACAATCTTCAAGAAGTCATTTCGTATTCACTCTTCGAATATACGGTGTAAACGAGGTATGGATGTATCTTTCTCTATTAATAGTCAAAATCGAAAACATGCTTCTTATTCCAGACTTAACTTCTACCCTAGGGTCTGTTTCTATTGTGGCTTATTTGAGCTTGTCTACTTAA 2010 0.3811 MVGTPMNGRRLSFGFGNGGHDLGPSSTPPSNAGSDYGSFIDFTREDVEALLNEKSKRKDRFNYKERCENMIDYIKRLKVCIRWFQDLELSYSLEQEKLKSSLELSQQKCMEIELLLKIKEEELNSIITEMRRNCASLQEKLVKEETDKSAAMESLVKEREARLDFERSQTTLSEDLGRAQRELETANQKISSLNEMYKRLQEYITSLQQYNGKLHSELSTVEGELKRVEKEKATVVENLTLLKGQLALSTASQEEAIKQKDAFASEVTSLRGELQQVRDDRDRQISQVQTLSTEIVKFKDSSEKSGSELNNLTVKTHELETKCTLQDSHIKELQEKLTIAENKLEVCDISAIETKTEFEGQQKLVNELEKRLADAEYKLIEGEKLRKELHNTILELKGNIRVFCRVRPLLPDESCSPEGKIISYPSSMEAAGRGIELAQNGQKHSFTFDRVFAPDASQQEVFTEISQLVQSALDGYKVCIFAYGQTGSGKTYTMMGRPGHPGEKGLIPRSLEQIFQTRQSQQPQGWKYEMQVSMLEIYNETIRDLLSTNKSSSDATRVDNGTPGKQYTIKHDANGNTHVSDLTVVDVQSVKEVAFLLNQAANSRSVGKTQMNEQSSRSHFVFTLRIYGVNEVWMYLSLLIVKIENMLLIPDLTSTLGSVSIVAYLSLST 669
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g04544 669 Coils Coil 358 385 - -
Tsu02g04544 669 MobiDBLite consensus disorder prediction 551 572 - -
Tsu02g04544 669 Gene3D Kinesin motor domain 342 644 IPR036961 -
Tsu02g04544 669 SMART kinesin_4 397 667 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tsu02g04544 669 Coils Coil 169 203 - -
Tsu02g04544 669 PANTHER KINESIN-LIKE PROTEIN KLP-3 12 631 - -
Tsu02g04544 669 Coils Coil 330 350 - -
Tsu02g04544 669 PANTHER KINESIN-LIKE PROTEIN 12 631 - -
Tsu02g04544 669 Coils Coil 211 238 - -
Tsu02g04544 669 Coils Coil 120 147 - -
Tsu02g04544 669 Pfam Kinesin motor domain 405 629 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tsu02g04544 669 ProSiteProfiles Kinesin motor domain profile. 399 669 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tsu02g04544 669 PRINTS Kinesin heavy chain signature 475 496 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tsu02g04544 669 PRINTS Kinesin heavy chain signature 609 626 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tsu02g04544 669 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 357 630 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g04544 Tsu-Chr2 54449675 54453880 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g04544 84 630 Calmodulin-binding Proteins AT5G65930 27.617 1.09e-41 161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g04544 K10405 - gmx:100801196 1040.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g04544 02 54449675 54453880 Tsu02g04544 02 54449675 54453880 ECH
Tsu02g04544 02 54449675 54453880 Tsu02g03064 02 33943502 33948337 PCT