Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g04530 ATGAAAGAGGAATCTACAGGATTAATTATTGGAATTTCTATTGGTGTTGTAATTGGAGTTGTTTTAGCAATTTCTGCATTGATCTGTTTTAGATATCATAGGAAGAGATCACAGATAGGGAATAGTAGTTCTCGAAGAGCGGCTACAATACCGATTCGCGCTAACGGTGCTGATTCTTGTACTATTTTATCAGATTCAACTTTAGGTCCTGAATCACCTGTAAGGTCTGGTAGAAATGGCATGAACTTCTGGATTGATGGTTTCAAGAAAAGTAATATGGTTTCTGCATCTGGAATACTTGAATATTCATACAAGGACTTGCAAAAAGCAACATATAATTTCACAACACTAATAGGACAAGGTGCATTTGGTCCTGTATATAAAGCTCAAATGTCTACCGGTGAGATTGTTGCAGTTAAAGTTCTTGCAACCAATTCTAAACAAGGGGAGAAAGAATTTCACACTGAGgTTATGTTGTTGGGAAGGTTACACCATAGAAACTTGGTCAATTTGGTTGGATATTGTGCAGAAAAGGGTCAACATATGCTTGTTTATGTCTACATGAGTAAAGGCAACTTAGCCTCCCACTTGTACAGTGAAGAAAATGGGAATCTGGGCTGGGATTTGAGGGTTCATATAGCTTTAGATGTAGCAAGAGGCTTGGAGTATCTTCATGATGGGGCAGTTCCTCCTGTCATCCATCGCGACATCAAATCTAACAATATTCTCTTGGATCAGTCCATGCGAGCCCGGGTTGCCGATTTTGGACTTTCCAGAGAAGAGATGGTGGATAAGCATGCAGCTGTTCGCGGTACCTTTGGTTATCTCGATCCTGAGTATATATCTTCAGGAACATTCACAAAGAAAAGTGACGTTTACAGTTTTGGAGTTTTGCTCTTTGAACTTATAGCCGGCCGAAATCCTCAGCAGGGTCTTATGGAATATGTTGAACTCGCAGCAATGAACACCGAGGGGAAAGTTGGTTGGGAGGAGATTGTTGATTCAAAACTTGAAGGAaaatgtgatttccaagaactTAATGAAGTAGCAGCACTTGCCTATAAATGCATCAACCGCGCCCCACGGAAGCGTCCTTCGATGAGGGACATAGTTCAAGTACTAACTCGGATCCTTAAAGCAAGACACCAAAGAAATCATCACAAGAAGTCCCTTTCAGCGACAACCGATGATGTTGCAATAGATGTTGATGAGCCAGAAAATAAGGATCATGTTACTGACCATAGAAGAGATGAATCTATAGATAGTGCAAATGACATGTATGATTTGTAA 1290 0.3977 MKEESTGLIIGISIGVVIGVVLAISALICFRYHRKRSQIGNSSSRRAATIPIRANGADSCTILSDSTLGPESPVRSGRNGMNFWIDGFKKSNMVSASGILEYSYKDLQKATYNFTTLIGQGAFGPVYKAQMSTGEIVAVKVLATNSKQGEKEFHTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVYMSKGNLASHLYSEENGNLGWDLRVHIALDVARGLEYLHDGAVPPVIHRDIKSNNILLDQSMRARVADFGLSREEMVDKHAAVRGTFGYLDPEYISSGTFTKKSDVYSFGVLLFELIAGRNPQQGLMEYVELAAMNTEGKVGWEEIVDSKLEGKCDFQELNEVAALAYKCINRAPRKRPSMRDIVQVLTRILKARHQRNHHKKSLSATTDDVAIDVDEPENKDHVTDHRRDESIDSANDMYDL 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g04530 429 CDD STKc_IRAK 118 377 - -
Tsu02g04530 429 Pfam Protein tyrosine and serine/threonine kinase 114 374 IPR001245 GO:0004672|GO:0006468
Tsu02g04530 429 PANTHER OS01G0253100 PROTEIN 5 403 IPR045271 GO:0004714|GO:0006468
Tsu02g04530 429 MobiDBLite consensus disorder prediction 384 429 - -
Tsu02g04530 429 ProSitePatterns Serine/Threonine protein kinases active-site signature. 232 244 IPR008271 GO:0004672|GO:0006468
Tsu02g04530 429 SUPERFAMILY Protein kinase-like (PK-like) 104 383 IPR011009 -
Tsu02g04530 429 PANTHER CALCIUM/CALMODULIN-REGULATED RECEPTOR-LIKE KINASE 1 5 403 - -
Tsu02g04530 429 ProSiteProfiles Protein kinase domain profile. 112 378 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g04530 429 MobiDBLite consensus disorder prediction 401 423 - -
Tsu02g04530 429 Gene3D Phosphorylase Kinase; domain 1 85 187 - -
Tsu02g04530 429 Gene3D Transferase(Phosphotransferase) domain 1 188 402 - -
Tsu02g04530 429 SMART serkin_6 112 378 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g04530 Tsu-Chr2 54350896 54355063 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g04530 24 374 Glycoside Hydrolase AT3G07070 40.000 1.08e-74 238
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-2 Tsu02g04530 PK_Tyr_Ser-Thr 2e-53 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g04530 - - gmx:100799586 762.681
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g04530 02 54350896 54355063 Tsu02g04530 02 54350896 54355063 ECH