Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g04526 ATGGACTCGCAACAACTTTATAGTTACAGCATGACTACAGGATTACCTTACATGCAATCTTTTCCAACTATTCCATCATCACTACAAAATGGTTTGCTTGGATCCTTGAAAGTTGGCGTCGGAAACTCACCTGATTCACCGTTTTCCTCTCATTTTGATTCTGATACTCTTTCTGCATTTAGTGACAGCCACGACCATTACAATTCGGGTGAAATCCTATCTGGTATAAGCTCCTCTTATAACTCATCACTCGAAACCAACCATTATATGCATAGGTCGGTTTCATCGGTCGATAGTCTCAAAGAAAGTTTGCAATTATATTCTGCTAGAAATTCTTCTCTACCAACTAACCATAAAATCAGACATGCCTTGTTGGAACTAGAAAATGCGCTGATGGCCCCTGATGATAACGAAGTTACGACATCTAATTCTTCATTGGGTGATAGCATCAGGGAGACGGCATCCGGCCCGAGATATAGATCATGGAGCCATGAGAACCAAGGGTCACAATATATTCAAACTCAGCCATCACATGTTACCAACAACAGCAGGCAATCAAATGAAACTGTGCATGTAGAGAAACGGCGAAAGTTGGAGGAGGAATCATCTCTACAAGAGTTTCCATCAGGTGATTTAAAGCAATTACTGATTGCATGTGCCAAAGCCATGGCTGAGAACAACACCCAACATTTTGACCGATTGATAGAAAGGGCTAGAAGTGCTGTCTCTATCAATGGAGAGCCAATCCAGAGGCTCGGTGCTTATATGGTAGAAGGGCTTGTTGCAAGGAAGGAAGCATCAGGGAATAGCATCTATCATGCTCTTAAGTGCCGTGAGCCAGAAGGCGAAGAGCTACTCACATACATGCAACTGCTTTTCGAAATCTGTCCGTACTTAAAATTCGGTTACATGGCTGCAAATGGAGCTATTGCCGAAGCTTGCAGGAATGAGGATCGCATACATATCATAGATTTTCAGATTGCTCAAGGAACTCAATGGATGACACTACTTCAAGCTCTTGCTGCAAGACCTGGCGGGGCTCCCCATGTGAGGATCACAGGAATTGATGACCCCGTCTCAAAATATGCACGCGGCGATGGACTAGAAGTAGTCGGGAAAAGATTGGCCTTGATGTCCAAGAAATTCAACATCCCGGTCGAGTTTCATGGTATTCCTGTTTTTGGTCCCGACGTTACAAGAGACATGCTCGATATCAGAGTCGGAGAAGCTTTGGCTGTGAATTTTCCTTTGCAACTGCATCACACAGCTGACGAGAGTGTCGATGTGAACAATCCAAGAGATGGACTTTTAAGATTGGTGAAATCTCTTGCTCCGAAAGTGGTCACTCTTGTGGAGCAAgaatcaaacacaaacacaacacCTTTCTTCAACAGGTTCATAGAAACCTTAGATTACTACTTGGCTATCTTCGAGTCCATCGATGTTACCCTCTCGCGAGACAGCAAGGAAAGGATTAATGTCGAGCAACATTGTTTGGCTCGTGATATCGTGAACGTCATTGCTTGCGAAGGCAAAGAAAGGGTCGAGCGTCATGAACTATTAGGTAAGTGGAAGTCTAGGTTGACGATGGCCGGATTTCGTCAATGTCCTTTAAGTTCTTATGTGAATTCTGTTATAAGAAGCCTTCTAAGATGCTATTCAGAACACTATACACTAGTGGAGAAAGATGGGGCAATGCTTTTAGGGTGGAAGAACAGAAATTTGATATCAGCTTCAGCTTGGCATTGA 1749 0.4294 MDSQQLYSYSMTTGLPYMQSFPTIPSSLQNGLLGSLKVGVGNSPDSPFSSHFDSDTLSAFSDSHDHYNSGEILSGISSSYNSSLETNHYMHRSVSSVDSLKESLQLYSARNSSLPTNHKIRHALLELENALMAPDDNEVTTSNSSLGDSIRETASGPRYRSWSHENQGSQYIQTQPSHVTNNSRQSNETVHVEKRRKLEEESSLQEFPSGDLKQLLIACAKAMAENNTQHFDRLIERARSAVSINGEPIQRLGAYMVEGLVARKEASGNSIYHALKCREPEGEELLTYMQLLFEICPYLKFGYMAANGAIAEACRNEDRIHIIDFQIAQGTQWMTLLQALAARPGGAPHVRITGIDDPVSKYARGDGLEVVGKRLALMSKKFNIPVEFHGIPVFGPDVTRDMLDIRVGEALAVNFPLQLHHTADESVDVNNPRDGLLRLVKSLAPKVVTLVEQESNTNTTPFFNRFIETLDYYLAIFESIDVTLSRDSKERINVEQHCLARDIVNVIACEGKERVERHELLGKWKSRLTMAGFRQCPLSSYVNSVIRSLLRCYSEHYTLVEKDGAMLLGWKNRNLISASAWH 582
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g04526 582 ProSiteProfiles GRAS family profile. 203 582 IPR005202 -
Tsu02g04526 582 MobiDBLite consensus disorder prediction 136 151 - -
Tsu02g04526 582 MobiDBLite consensus disorder prediction 159 187 - -
Tsu02g04526 582 Pfam GRAS domain family 212 581 IPR005202 -
Tsu02g04526 582 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 20 582 IPR005202 -
Tsu02g04526 582 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 20 582 - -
Tsu02g04526 582 MobiDBLite consensus disorder prediction 136 192 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g04526 Tsu-Chr2 54321336 54324817 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g04526 203 581 GRAS Transcription Factor Family AT1G50600 62.533 1.34e-175 506
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Tsu02g04526 GRAS 1.3e-128 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g04526 - - gmx:100799073 906.746
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g04526 02 54321336 54324817 Tsu02g04526 02 54321336 54324817 ECH