Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g04509 ATGGAAAGCTTCAAGGTGCTAGTCTACTGCTTTCTTTTCTTTAACTTCATACCAACCTTCAACACCTTAGAAACCATTTTTCCAGGACAATCTCTCAAACATAATGAAACACTAATCTCAAAAAATGGATTATTTGAAGCTGGTTTCTTCAACTTTGGTGATTTAAATAACCAATATTTTGGTATAAGGTACAAAGATATTTCACCACAAACTCTTGTGTGGATAGCAAATAGAGATTTTCCATTAAGAAACTCATCAGGAACTTTGAGTGTCACAGATAAAGGAACTCTTGTTGTTCTTGATTCCAAAGGGATTATGAAATGGTCCTCTAATTCATCAAAAACAGCGACAGAAGTTACAAAGCCAATTGTTCAACTATTGGAAAGTGGAAACCTTATTGTGAAAGATGAAACCAGGTATGATATTGTATGGCAAAGTTTTGATATTCCGGGTGATACTTCACTACCTGGTATGAAAATTAGAAGCAGTTTAGTAAATGGTGATAAAAAAGGTTTGGTTTCTTGGCGAGATAAACAAGATCCTGCTAATGGTTTGTATTCGTACCGTATAGATACTAATGGTTTACCTCAAGTAGTAATTGCAAAAGGAAACTCATTTTATGTCAGAGTAGGATCATGGAATGGAAATATGTTAGCTGGTATTCCTTCGACAATACTTTATCCCTTTAGTTTTTCATTAGTGACTACTGAGAAGGAAGTTTCTTATGGATATGAAATTTTGGACAAGTCAATTGTTAGATACATGCTCACTTCAACCGGTCAAATGGCGCGATACATATTGAACGAGCAGACAAAGATTTGGGATCTTTTATTTCTTGCCCCTTCAGACAATTGTGATCATTATGCTATGTGTGGTGCAAATTCTAATTGTAATATTATTAACTCACCATCAACAATATGTGAATGTCTTGAAGGTTTCATTCCAAAGTCTCAAGAAAAGTGGAATTCGCAAAAATGGTCGGATGGTTGTGTTAGGAGAGTTAAGTTAGATTGTGACAACAAGGATAAATTTTATATGCTTATGGGAATGAAGTTGCCGGATACATCAAAATCTTGGTTTAATAAGAGCATGAACCTTGAAGAATGTGAGAGATTCTGTAAGAGAAACTGTAATTGCACAGCATATGCAAATTTAGATATCAGAGATGGTGGAAGTGGTTGCTTGCTTTGGTTTAATGACATTTTGGATGTCAAAACACTAAGTTCTGAAGGACAAGACATTTACATCAGAGTTGCAGCTTCAGAACTAGACCATAAAAAAGGCATGAACAAGAAGCTTGCTGGAACTCTAGTAGGcttaagtttgtttattgtgaTCATGATAATTCTTGGAATCTGCGTATATCGGAATCGAAGGAAGAAACTAGAGAGTCCAGGGTTGATTCAAGTATTTAGCTTCAAGAATCAAACTGACAGCaaagaaaatgaagatattGACATACCAATATATGATCTATCAACCATAGCTAATGCAACCAATAACTTTTCCATTGATAACAAATTGGGCCAAGGAGGATTTGGACCAGTTTACAAGGGTAAATTGGAAAATGGACAAGATATTGCTGTGAAAAGGCTTTGCAATACTTCAGAACAAGGACCAAAAGAGTTCATAAATGAAGTTAAGCTAATTGCAAATCTTCAGCACAGAAATCTTGTGAAACTACTTGGTTGTTGCATTCACCATGATGAGAGACTCTTGATATATGAATTCATGATCAATAGAAGCTTGGACTACTTCATTTTTGATCAAACTAGAAAAAATTTACTGGATTGGACTCAAcgatttcaaattatttgtggGATTGCTCGAGGACTTCTTTATCTTCATGAAGATTCAAGATTAAGGATTATCCATAGAGATCTCAAGACCAGCAATATTCTTCTAGGCGAAAATATGAATCCTAAAATATCAGACTTTGGTCTTGCTAGAACATTATGGGGAGATGAAGCGGCAATGGAAACAAAAAAAGTAGTAGGAACTCATGGTTACATATCACCAGAGTATGTAGCACGTGGATTTTTCTCGGTGAAAtctgatgtctttagtttcggCGTTATAATACTAGAGACAATAAGTGGGAAAAAGAACAGGGAATATAGTTACTACCATGATCTTGACCTTCTTGGATATGCATGGAGAATGTGGTGTGAAACAACGTCGTTGAAGTTGTTAGACAAATCTCTATGCGATTCGATTGTTGTAGCTGAAGTTGACATATTGAGATGTATTCAGATAGGGCTATTATGTGTGCAAGAGAGACCTGATGACAGGCCAGACATGTCAGCTGCAGTTCTAATGCTGAATGGTGAAAAACCATTGCCTAAGCCAAAGAAACCAGCCTTTTATCCACGCCAATTAGGATCTTCATCAGGAACTACTATGCTGCATTCAAATAATGAAGTTTCCATAACATTGTTAGATGCACGATAG 2451 0.3497 MESFKVLVYCFLFFNFIPTFNTLETIFPGQSLKHNETLISKNGLFEAGFFNFGDLNNQYFGIRYKDISPQTLVWIANRDFPLRNSSGTLSVTDKGTLVVLDSKGIMKWSSNSSKTATEVTKPIVQLLESGNLIVKDETRYDIVWQSFDIPGDTSLPGMKIRSSLVNGDKKGLVSWRDKQDPANGLYSYRIDTNGLPQVVIAKGNSFYVRVGSWNGNMLAGIPSTILYPFSFSLVTTEKEVSYGYEILDKSIVRYMLTSTGQMARYILNEQTKIWDLLFLAPSDNCDHYAMCGANSNCNIINSPSTICECLEGFIPKSQEKWNSQKWSDGCVRRVKLDCDNKDKFYMLMGMKLPDTSKSWFNKSMNLEECERFCKRNCNCTAYANLDIRDGGSGCLLWFNDILDVKTLSSEGQDIYIRVAASELDHKKGMNKKLAGTLVGLSLFIVIMIILGICVYRNRRKKLESPGLIQVFSFKNQTDSKENEDIDIPIYDLSTIANATNNFSIDNKLGQGGFGPVYKGKLENGQDIAVKRLCNTSEQGPKEFINEVKLIANLQHRNLVKLLGCCIHHDERLLIYEFMINRSLDYFIFDQTRKNLLDWTQRFQIICGIARGLLYLHEDSRLRIIHRDLKTSNILLGENMNPKISDFGLARTLWGDEAAMETKKVVGTHGYISPEYVARGFFSVKSDVFSFGVIILETISGKKNREYSYYHDLDLLGYAWRMWCETTSLKLLDKSLCDSIVVAEVDILRCIQIGLLCVQERPDDRPDMSAAVLMLNGEKPLPKPKKPAFYPRQLGSSSGTTMLHSNNEVSITLLDAR 816
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g04509 816 ProSitePatterns Serine/Threonine protein kinases active-site signature. 623 635 IPR008271 GO:0004672|GO:0006468
Tsu02g04509 816 Gene3D Transferase(Phosphotransferase) domain 1 578 782 - -
Tsu02g04509 816 Pfam D-mannose binding lectin 71 176 IPR001480 -
Tsu02g04509 816 Gene3D Phosphorylase Kinase; domain 1 475 577 - -
Tsu02g04509 816 ProSiteProfiles Bulb-type lectin domain profile. 23 147 IPR001480 -
Tsu02g04509 816 SMART ntp_6 339 418 IPR003609 -
Tsu02g04509 816 ProSiteProfiles PAN/Apple domain profile. 338 419 IPR003609 -
Tsu02g04509 816 Pfam PAN-like domain 338 404 IPR003609 -
Tsu02g04509 816 Gene3D Hepatocyte Growth Factor 335 416 - -
Tsu02g04509 816 SMART serkin_6 502 750 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g04509 816 CDD B_lectin 30 150 IPR001480 -
Tsu02g04509 816 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 13 816 - -
Tsu02g04509 816 SMART blect_4 29 150 IPR001480 -
Tsu02g04509 816 CDD PAN_AP_plant 334 419 - -
Tsu02g04509 816 ProSiteProfiles Protein kinase domain profile. 502 788 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g04509 816 PIRSF SRK 1 816 IPR024171 GO:0004674
Tsu02g04509 816 SUPERFAMILY alpha-D-mannose-specific plant lectins 67 214 IPR036426 -
Tsu02g04509 816 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 13 816 - -
Tsu02g04509 816 Gene3D - 20 147 IPR036426 -
Tsu02g04509 816 Pfam Protein tyrosine and serine/threonine kinase 503 718 IPR001245 GO:0004672|GO:0006468
Tsu02g04509 816 Pfam S-locus glycoprotein domain 209 317 IPR000858 GO:0048544
Tsu02g04509 816 CDD STKc_IRAK 508 776 - -
Tsu02g04509 816 SUPERFAMILY Protein kinase-like (PK-like) 486 774 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g04509 Tsu-Chr2 54082301 54085921 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g04509 434 791 Receptor kinase-like Gene Family AT4G23190 49.057 8.01e-112 351
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Tsu02g04509 PK_Tyr_Ser-Thr 3.4e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g04509 - - ccaj:109805721 1135.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g04509 02 54082301 54085921 Tsu02g04509 02 54082301 54085921 ECH