Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g04508 ATGCTACTAATTTGTTGCCTTCTTTTCTTTAACTTCATACCAACCTTTAACACCTTAGAAACCATTGTTCCAGGACAATCTCTCAAACATAATGAGACACTAATCTCAAAAAATGGATTATTTGAAGCTGGTTTCTTCAACTTTGGTGATTTAAATAACCAATATTTTGGTATAAGGTACAAAGATATTTCACCACAAATTCTTGTGTGGATAGCAAATAGAGATATTCCATTAGGAAGTTCATCAGGAAATTTGAATGTCACAGATAAAGGAACTCTTATTGTTCTTGATTCAGAAGGGGTTATGAAATGGTCTTCTGATTCATCAAAAACAGCTTCATCAAAAACAGCAACAAATGTTACAAAACCAATTGTGGAATTATTGGAAAGTGGAAACCTTATTGTGAAAGATGAAACCAACCCAGATGATATTTTGTGGCAAAGTTTTGATATTCCTGGTGACACTTTGCTACCTGGTATGAAAATTAGAAGCAGTTTAGTAAATGGTGATCAAAAAGGTTTGGTTTCGTGGAGAGATAAACAAGATCCTACTACTGGTTTGTATTCGTATCGTATAGATACTAATGGTTTACCTCAAGTAGCAATTGAACAAGGAAACTCATTTTATGTCAGAATAGGATCATGGAATGGAAATATGTTAGCCGGAATTCCTTCGGCTATACTTAAAGATTCCTTTAATTTTACATTAGTGACTACTGATAAGGAAGTTTCTTATGGATATGAACTTTTGGACAAGTCAATTGTTTCAAGATACACGCTCACTTCATCCGGTCAAATTGCGCGTTACACGTTGGACGAGCAGACAAAGAGTTGGGATCTTTCATTTCTTGGCCCTTCAGATAGTTGTGATCATTATGCTACCTGTGGTGCAAATTCTAATTGTGATCCTAATAAATCACCAACAACAATATGTGAATGTCTTGAAGGTTTCATTCCAAAGTTTCAAGATAAGTGGAATTCGCAAAAATGGTCGGATGGTTGTGTTAGGAGAGTTAAGTTAGATTGTGACAACAGGGATAAATTTTATATGCTTATGGGAATGAAGTTGCCGGATACATCAAAATCTAAGTTTAATAAGAGCATGAACCTTGAAGAATGTGAGAGATTCTGTAAGAGAAACTGTAATTGCACAGCATATGCAAATTTAGATGTCAGAAATGGTGGAAGTGGTTGCTTGCTTTGGTTTAATAACATTATGGATGTCAAAAAACTAAGCTCAGGAGGACAAAACATTTACATCAGAGTTGCAGCTTCAGAACTAGACCATAATAAAGGCATGAACAAGAAGCTTGCTGGAATTCTAGTAGGcttaagtttgtttattgtgaTCATGATAATTCTTGGAGTCTGCGTATATCGGAATCGAAGGAAGAAACTAGAGAGTCCAGGGTTGATTCAAGTATTTAGCTTCAAGAATCAAACTGACAGCaaagaaaatgaagatattGACATACCAATATATGATCTATCAACCATAGCTAATGCAACCAATAACTTTTCCATTGATAACAAATTGGGCCAAGGAGGATTTGGACCAGTTTACAAGGGTAAATTGGAAAATGGACAAGATATAGCTGTGAAGAGGCTTTGCAATACTTCAGCACAAGGACCAAAAGAGTTCATAAATGAAGTTAAGCTGATAGCAAATCTTCAGCACAGAAACCTTGTGAAACTACTTGGCTGTTCCATTCATCATGATGAGAGACTCTTGATATATGAATTCATGATCAACAGAAGCTTGGACTACTTCATTTTTGATCAAACTAGAAAAAAATTACTAGGTTGGACTCGAcgatttcaaattatttgtggGATTGCTCGAGGACTTCTTTATCTTCATGAAGATTCTAGATTAAGGATTATCCACAGAGATCTCAAGACCAGCAATATTCTTCTAGGCGAAAATATGAATCCTAAAATATCGGACTTTGGTCTTGCTAGAACATTATGGGGAGATGAAGCAGAAGTGGAAACAAATAAAGTTGTAGGAACTCATGGTTACATATCTCCAGAGTATGCAGCACGTGGATTTTTCTCAGTGAAAtctgatgtctttagtttcggTGTTATTATACTAGAGACAATAACTGGAAAAAGGAATAGGGAATATAGTGACCATCATGATCTTGACCTTCTCGGACATGCATGGAGAATGTGGTGTGAAACAACGCCGTTGAAGCTGATAGACGAAACTCTAAGCGATTCAATTGTTGGAGCTGAAGCTGAAGTATTAAGATGTATTCAGATAGGGCTTTTATGTGTGCAAGAGAGACCCGATGACAGGCCAGACATGTCAGCTGCAGTTCTGATGTTGAATGGTGAAAAAGTATTGCCTAAGCCAAAGGAACCTGCCTTTTATCCTCACCAATTAGGATCTTCATCAGGAACTACTGTACTACATTCAAATAATGAAGTTTCCATAACATTGTTAGATGCAAGATAG 2463 0.3532 MLLICCLLFFNFIPTFNTLETIVPGQSLKHNETLISKNGLFEAGFFNFGDLNNQYFGIRYKDISPQILVWIANRDIPLGSSSGNLNVTDKGTLIVLDSEGVMKWSSDSSKTASSKTATNVTKPIVELLESGNLIVKDETNPDDILWQSFDIPGDTLLPGMKIRSSLVNGDQKGLVSWRDKQDPTTGLYSYRIDTNGLPQVAIEQGNSFYVRIGSWNGNMLAGIPSAILKDSFNFTLVTTDKEVSYGYELLDKSIVSRYTLTSSGQIARYTLDEQTKSWDLSFLGPSDSCDHYATCGANSNCDPNKSPTTICECLEGFIPKFQDKWNSQKWSDGCVRRVKLDCDNRDKFYMLMGMKLPDTSKSKFNKSMNLEECERFCKRNCNCTAYANLDVRNGGSGCLLWFNNIMDVKKLSSGGQNIYIRVAASELDHNKGMNKKLAGILVGLSLFIVIMIILGVCVYRNRRKKLESPGLIQVFSFKNQTDSKENEDIDIPIYDLSTIANATNNFSIDNKLGQGGFGPVYKGKLENGQDIAVKRLCNTSAQGPKEFINEVKLIANLQHRNLVKLLGCSIHHDERLLIYEFMINRSLDYFIFDQTRKKLLGWTRRFQIICGIARGLLYLHEDSRLRIIHRDLKTSNILLGENMNPKISDFGLARTLWGDEAEVETNKVVGTHGYISPEYAARGFFSVKSDVFSFGVIILETITGKRNREYSDHHDLDLLGHAWRMWCETTPLKLIDETLSDSIVGAEAEVLRCIQIGLLCVQERPDDRPDMSAAVLMLNGEKVLPKPKEPAFYPHQLGSSSGTTVLHSNNEVSITLLDAR 820
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g04508 820 Pfam Protein tyrosine and serine/threonine kinase 507 773 IPR001245 GO:0004672|GO:0006468
Tsu02g04508 820 SMART ntp_6 343 422 IPR003609 -
Tsu02g04508 820 Pfam D-mannose binding lectin 68 178 IPR001480 -
Tsu02g04508 820 CDD PAN_AP_plant 338 423 - -
Tsu02g04508 820 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 11 820 - -
Tsu02g04508 820 PIRSF SRK 1 820 IPR024171 GO:0004674
Tsu02g04508 820 ProSiteProfiles PAN/Apple domain profile. 342 423 IPR003609 -
Tsu02g04508 820 Gene3D - 16 149 IPR036426 -
Tsu02g04508 820 CDD B_lectin 26 152 IPR001480 -
Tsu02g04508 820 SUPERFAMILY alpha-D-mannose-specific plant lectins 68 183 IPR036426 -
Tsu02g04508 820 Gene3D Transferase(Phosphotransferase) domain 1 582 786 - -
Tsu02g04508 820 SUPERFAMILY Protein kinase-like (PK-like) 491 805 IPR011009 -
Tsu02g04508 820 ProSiteProfiles Bulb-type lectin domain profile. 19 148 IPR001480 -
Tsu02g04508 820 Pfam S-locus glycoprotein domain 211 320 IPR000858 GO:0048544
Tsu02g04508 820 CDD STKc_IRAK 512 780 - -
Tsu02g04508 820 Gene3D Phosphorylase Kinase; domain 1 479 581 - -
Tsu02g04508 820 SMART blect_4 25 152 IPR001480 -
Tsu02g04508 820 Pfam PAN-like domain 342 408 IPR003609 -
Tsu02g04508 820 Gene3D Hepatocyte Growth Factor 339 421 - -
Tsu02g04508 820 SMART serkin_6 506 778 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g04508 820 ProSitePatterns Serine/Threonine protein kinases active-site signature. 627 639 IPR008271 GO:0004672|GO:0006468
Tsu02g04508 820 ProSiteProfiles Protein kinase domain profile. 506 784 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g04508 820 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 11 820 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g04508 Tsu-Chr2 54076099 54080414 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g04508 438 795 Receptor kinase-like Gene Family AT4G23190 48.787 1.88e-113 356
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Tsu02g04508 PK_Tyr_Ser-Thr 2.8e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g04508 - - ccaj:109805721 1144.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g04508 02 54076099 54080414 Tsu02g04508 02 54076099 54080414 ECH