Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g04492 ATGGCTTCCACTCCAAATTGTGGCCAGTGTTTGCAAATCACTCAGACCTTCATCGACCTCGATTACTTGCCCACAAGAAGAATGTTCAAAGACAACAATCGTAACATTCTCATCCGCCAACATGCCGTTTCAGTAATCGCTAAGCTCGCAAAGATGTATCCACCAGATGCATATGTTCCGTATCTTGCTATGAACTACTTTGATCGCTTCTTTTGCCATTATGAAACGACGCCTGCGGAAGGTCTGACTGCTACCGAAAAAGTTCGGTTGATTGCGCTATCTTGTTTCACCTTATCTGCTGCCAATATGAGGACAAGCTCCTTCTTGATTAAAGATCTTTTGATTGCTCTACATAGTGACATGGATCTTAACTGGATAAGTCATTACGCGGTAACGACAATGCAGCATCGCATTATAGAAAATCTTAACAAGAAGATGAAACCTGTAACTGCCTTCTGGTTTCTGGACCACTATTATGATCACTTCAAACCACTAGGTTTACAACGCCGTAGCATAAATGAGATCGTAGTTCAAGCTCAAGGAGACCACACCTTTGTTGATTTCATGCCTACTGACATTGCGTTCTCCGCTAGTGTGGCTGCTGCCACAATTGCATTAAAGGAACTTCCAGAAGACATTAACAATAATATTAGCAACAATGTGACTAGCTATAGAGTGGACGAACTTGCGAAGAAGATGATAGAACTTTGCCATAGAATGAACATCGTGATTGATAAAATAGAGGTAGCAGCAGAAGAGACTGAGGCAGAAAAACAAAGACTGGCCAAGGATAAGGGCAAAGGCAAGGCAGTGGAAAAGGTTAAGGAGCCACGGCCACAGATGGAGGCAGCCATTTCAAATATTGAACCAAGGAAGCACATGAACTTTGAGCTGAAATGGGCCACTGATGTTCTACCACTAGAAGAAGACACTGATGTTCCAGCACTTGAAGAAGAAATAGAACATGAGCAGCCAGCAGCTATAAGCCTTAGGATACCAGGGACTggaaagaatataaatgtaggCTGCTGTACCTGCAACATCATTCAAAATGATTTCGCAATTTCTTGTCCAGTTCAAACTATCGGGATTATTGGCTTTGAATTGTGTCCAGTACAAAATGCTTTGGTAGTTTCTTGTGCAGTTAAAACTATAGTTTTAGGAAAGGGATATGAAGCTAAAGGTCATCATGCTCCTGTCCTCCATGCTTTTTCTCTAACAAAAGCAACAATGATGGTTTCGTGA 1245 0.4137 MASTPNCGQCLQITQTFIDLDYLPTRRMFKDNNRNILIRQHAVSVIAKLAKMYPPDAYVPYLAMNYFDRFFCHYETTPAEGLTATEKVRLIALSCFTLSAANMRTSSFLIKDLLIALHSDMDLNWISHYAVTTMQHRIIENLNKKMKPVTAFWFLDHYYDHFKPLGLQRRSINEIVVQAQGDHTFVDFMPTDIAFSASVAAATIALKELPEDINNNISNNVTSYRVDELAKKMIELCHRMNIVIDKIEVAAEETEAEKQRLAKDKGKGKAVEKVKEPRPQMEAAISNIEPRKHMNFELKWATDVLPLEEDTDVPALEEEIEHEQPAAISLRIPGTGKNINVGCCTCNIIQNDFAISCPVQTIGIIGFELCPVQNALVVSCAVKTIVLGKGYEAKGHHAPVLHAFSLTKATMMVS 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g04492 414 Coils Coil 244 264 - -
Tsu02g04492 414 SUPERFAMILY Cyclin-like 23 143 IPR036915 -
Tsu02g04492 414 Pfam Cyclin, N-terminal domain 22 145 IPR006671 -
Tsu02g04492 414 PANTHER CYCLINS 33 308 IPR039361 -
Tsu02g04492 414 Gene3D - 21 231 - -
Tsu02g04492 414 PANTHER CARBOXY-TERMINAL DOMAIN CYCLIN 33 308 - -
Tsu02g04492 414 CDD CYCLIN 39 113 IPR013763 -
Tsu02g04492 414 Gene3D - 25 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g04492 Tsu-Chr2 53823270 53827267 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g04492 21 240 Core Cell Cycle Gene Families AT1G70210 23.684 1.54e-07 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g04492 - K18810 aprc:113855478 153.295