Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g04484 ATGGCATTGATGGCAGCAAGTTCAGCAACTGTTGTTAAGCAAACTCCTTTTCTTGGTCAAAGGAAGAGTGCCAATCCTCTTAGAGATGTTGTCGCCATGGGAACTTCAAAAGTCACTATGGGAAATGAATTGTGGTATGGACCAGACAGAGTGAAATATTTGGGACCATTTTCAGCTCAGACTCCTTCATACTTAACCGGAGAATTCCCCGGTGATTACGGATGGGACACTGCTGGATTATCAGCTGACCCAGAAGCATTTGCCAAGAACAGGGCTCTTGAGGTGATTCATGGGAGATGGGCTATGCTAGGAGCACTAGGATGCATCACACCAGAAGTACTTGAAAAATGGGTGAGAGTTGACTTCAAAGAACCAGTTTGGTTCAAAGCAGGATCACAAATATTCTCAGAAGGTGGACTTGACTACTTAGGAAACCCAAACCTTGTTCATGCACAAAGCATCTTAGCAGTACTAGGTTTCCAAGTTGTTCTAATGGGACTTGTCGAAGGATTCCGCATCAACGGTCTTCCCGGTGTTGGAGATGGCAACAATCTTTACCCTGGTGGCCAATACTTTGATCCTCTTGGTCTTGCTGATGACCCGGTTACATTCGCCGAACTTAAAGTGAAGGAAATCAAGAATGGAAGATTGGCTATGTTTtcaatgtttggtttctttGTTCAAGCTATTGTTACTGGTAAAGGACCTTTGGAGAATCTATTGGATCACATTGATAACCCTGTTGCTAACAATGCTTGGGTTTATGCTACCAAGTTTGTACCTGGTGCTTAA 792 0.4293 MALMAASSATVVKQTPFLGQRKSANPLRDVVAMGTSKVTMGNELWYGPDRVKYLGPFSAQTPSYLTGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCITPEVLEKWVRVDFKEPVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLPGVGDGNNLYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHIDNPVANNAWVYATKFVPGA 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g04484 263 Gene3D Chlorophyll a/b binding protein domain 52 256 - -
Tsu02g04484 263 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 5 263 IPR001344 GO:0009765|GO:0016020
Tsu02g04484 263 PANTHER CHLOROPHYLL A-B BINDING PROTEIN, CHLOROPLASTIC 5 263 - -
Tsu02g04484 263 Pfam Chlorophyll A-B binding protein 62 229 IPR022796 -
Tsu02g04484 263 SUPERFAMILY Chlorophyll a-b binding protein 44 260 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g04484 Tsu-Chr2 53724935 53726149 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g04484 8 262 Chloroplast and Mitochondria Gene Families AT2G05070 68.045 1.01e-124 353
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g04484 K08914 - ini:109178256 505.753
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g04484 02 53724935 53726149 Tsu02g04484 02 53724935 53726149 ECH