Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g04465 ATGCCAGATGACTTGTTTGTCGATCAGGCATTGTCGCTTAGTCCATTAGCCCCTTTTAGTGGCCTTTCGGAACTTGCTTTTGAAACCGTTTACCGATTGAACATAGGAGGAACCTTGCTCACTGCCGAAAACGATACATTGGGAAGGACTTGGGAGAATGATCAGAAGTATCTCCATGTAAACAGCTCGGTTACTAATGTGTCGGCTAGTCCTTCAAGCATTAGGTATCGGCCGGGCGTTACTGCTGAGACGGCGCCTAATTGGGTTTATGCCACTGCTGAAGCAATGGGGGATGCAAATGTTGCCAATTCAAATTTCAACATTACTTGGGTCTTTGATGTCGATCCAAGTTTCTCCTATTTTGTTCGGCTTCACTTTTGCGATATTATTAGCAAAGCAATGAATACGTTAGTTTTCAATGTATTCATAAATACTGATATTGCTATTGGAAGCCTTGACCTATCATCGATGACTAATGATTTGGCTTTGCCTTACTTTAAGGACTTTGTTTCCAATGCCTCATCTGATAACACTTTGACGGTAAGTGTTGGTCCTGATACAATGGCGGACATTACAAATGCAACTATGAATGGATTGGAGATAATGAAAATCAGCAATGCATTGAAGAGCTTGGATGGACTTTCTTCGGTCAAGAGTCTTCTTCctagttcaaaatcaaacaagaaCAAGATAGGAATCATCGTTGGTTCCGCCGCTGGTGCTTTAGTTGCCTTGGCTTTTATTGGTTTGTGTTTTTGCTTCTTGGCgagaagaaaattgaaatctCCTCAAGAGGGTGGTCATTCATGGCTGCCATTGCCCTTATATGGAAATTCTCAGACCATGACGAAAATGTCAACAACTTCACAGAAGAGTGGGGGAACTGCAAGCTTCATTTCTTCGACGAATCTCGGACGGTTCTTCACTTTCCAAGAAATCCTAGATGCAACCAACAAATTTGATGAGAAGCTTCTTCTTGGTGTTGGTGGTTTCGGCAGGGTTTATAGGGGAATCCTTGATGATGGTACCACAGTAGCTGTTAAAAGGGGAAATCCAAGATCCGAACAAGGTCTTGCTGAATTCCGAACAGAAATTGAGATGTTATCGAAGCTTCGCCATCGTCATCTTGTGTCTCTAATTGGTTATTGTGATGAGAGGTCAGAAATGATTCTTGTCTATGAATATATGGCTAATGGTCCCCTCAGGAGTCATTTGTATGGAACTGATCTACCACCTCTATCGTGGAAACAACGGCTTGATATTTGCATCGGAGCAGCAAGAGGACTTCATTATCTCCACACCGGTGCATCGCAAAGTATAATTCATCGAGACGTAAAGACAACAAACATCCTTTTAGATGATAGCTTTGTTGCTAAAGTTGCTGACTTTGGCCTCTCCAAAACCGGTCCTGCGCTTGATCAGACTCACGTAAGCACGGCTGTTAAAGGTAGTTTCGGTTATCTTGATCCAGAATACTTTAGAAGGCAACAACTCACAGAGAAATCAGATGTTTATTCATTCGGAGTAGTTTTAATGGAAGTGCTATGCACAAGACCGGCTTTGAACCCTGTCCTTCCTAGGGAACAGGTTAATATAGCCGAGTGGGCGATGAATTGGCAGAAGAAGGGAATGCTCGATCAAAtcatggatcaacaacttgtcggAAAGGTCAATCCTGCTTCGCTTAAGAAGTTCGGGGAAACAGCTGAGAAGTGTTTGGCTGAGTATGGAGTGGATAGGCCATCTATGGGAGATGTTCTATGGAACCTTGAATATGCTTTGCAGCTCCAAGAAACCTCATCAGCACTCATGGAACCAGAAGATAACAGTACGAATCACATTACCGGAATTCAGTTGACACGTCTTGAGAATTTTGATAACAGTGTTAGTATGGTTGATGGAAGCAACTCTGTCACGGACGAAGATGGAGAAGACGCTGCTACAAGTGCAGTGTTCTCGCAATTGGTGAATCCACGTGGAAGATGa 1986 0.4189 MPDDLFVDQALSLSPLAPFSGLSELAFETVYRLNIGGTLLTAENDTLGRTWENDQKYLHVNSSVTNVSASPSSIRYRPGVTAETAPNWVYATAEAMGDANVANSNFNITWVFDVDPSFSYFVRLHFCDIISKAMNTLVFNVFINTDIAIGSLDLSSMTNDLALPYFKDFVSNASSDNTLTVSVGPDTMADITNATMNGLEIMKISNALKSLDGLSSVKSLLPSSKSNKNKIGIIVGSAAGALVALAFIGLCFCFLARRKLKSPQEGGHSWLPLPLYGNSQTMTKMSTTSQKSGGTASFISSTNLGRFFTFQEILDATNKFDEKLLLGVGGFGRVYRGILDDGTTVAVKRGNPRSEQGLAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVYEYMANGPLRSHLYGTDLPPLSWKQRLDICIGAARGLHYLHTGASQSIIHRDVKTTNILLDDSFVAKVADFGLSKTGPALDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMNWQKKGMLDQIMDQQLVGKVNPASLKKFGETAEKCLAEYGVDRPSMGDVLWNLEYALQLQETSSALMEPEDNSTNHITGIQLTRLENFDNSVSMVDGSNSVTDEDGEDAATSAVFSQLVNPRGR 661
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g04465 661 Gene3D Transferase(Phosphotransferase) domain 1 396 615 - -
Tsu02g04465 661 ProSitePatterns Protein kinases ATP-binding region signature. 326 348 IPR017441 GO:0005524
Tsu02g04465 661 Pfam Protein tyrosine and serine/threonine kinase 325 586 IPR001245 GO:0004672|GO:0006468
Tsu02g04465 661 Gene3D Phosphorylase Kinase; domain 1 278 395 - -
Tsu02g04465 661 PANTHER OS07G0166700 PROTEIN 7 605 IPR045272 GO:0004714|GO:0006468
Tsu02g04465 661 ProSitePatterns Serine/Threonine protein kinases active-site signature. 440 452 IPR008271 GO:0004672|GO:0006468
Tsu02g04465 661 Pfam Malectin-like domain 24 204 IPR024788 -
Tsu02g04465 661 CDD STKc_IRAK 326 591 - -
Tsu02g04465 661 PANTHER SERINE-THREONINE/TYROSINE-PROTEIN KINASE CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATED 7 605 - -
Tsu02g04465 661 Gene3D - 25 206 - -
Tsu02g04465 661 ProSiteProfiles Protein kinase domain profile. 320 593 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g04465 661 SMART serkin_6 320 593 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g04465 661 SUPERFAMILY Protein kinase-like (PK-like) 297 591 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g04465 Tsu-Chr2 53580223 53582208 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g04465 2 601 Receptor kinase-like Gene Family AT2G21480 58.292 0.0 713
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Tsu02g04465 PK_Tyr_Ser-Thr 4.6e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g04465 - - lang:109334411 1092.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g04465 02 53580223 53582208 Tsu02g04465 02 53580223 53582208 ECH