Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g04464 ATGGTGATGGTGAAACTTGTTTTGGTTGTTACTGTTATAGCATTTTTGGTAAATGTGTCATTTGCTGTATACACACCTGCAGATAATTATCTAATTGCTTGTGGTTCATCTAAAAGTATCACTTTTCAAGATCGTGTTTTCGTTCCGGATTCACAACATTCATCACTTGTGTTGAAAACTGGAAATTCAATTGTTGTTGCTAGTTCTAATTCAAGTGTTGTTCCATCTCCAATCTACCAATCAACTAGGATTTTCACTGAGAATGGTTCTTACAGATTTGATGTTTCTGAAGGTAGGCATTGGattagattatatttttatcctCTTCCAAACACTAGCCATAATTTGACTTCAGCTTCTATAAAAGTTGTTGGtggtgattttgttttgttaagcAACTTCACTTTTAGAAACTATAAAAGTTCTTATATGTTTAGGGAGTATGCTATCAATGCAATTTCTGATACTTTGACTGTAACCTTTATTCCTTTGCATGGTTCAGTTGCTTTTGTAAATGCAATTGAAGTTGTGTCGATGCCATATGACTTGTTTATGGGTAAGTCATTGTCGGTTGGTCCATTAGTCTGTTTTAGTGGCCTTCCGGAAAGTGCTTTTGAAACCATTTACCGATTGAACATAGGAGGAACCTTGCTCACTGCCGAAAACGACACGTTGGGAAGGACTTGGGAGAATGATCAGAAGTACCTCCATGTGAACAACTCAGTCACTAATGTCTCGGCTAGCCCTTCAAGAATTAGGTATCAATCGGGCATTACTAATGAGACGGCACCTAATTTGGTTTATGCCACTGCTGTAGCAATGGGGAGTGCTATCAATCCAAATTTCAACATTACTTGGGTCTTTGATGTGGATCCAACTATTCGAAGCCTTGACCTATCATCGATGACTAATGATTTCGCTCTGCCTTACTATATGGATTTTGTTTCCAATGCCTCATCGGATAACACTTTGACGGTAAGCATTGGTCCTGATGCATTGTCCGACAGTACAAATGCAAGTATAAATGGATTAGAGATAATGAAAATCAGCAATGCTTTGAAGGGCTTAGATGGAAGTGGAAATAATGGAAGTGGAAGTGGAAGTAATGGAAGTGGAAGTAGCAATAAGCACATAATAGTTGTCATTGTCATCGTCGTCGTTgtcatattaattttgtttgttctgCTCTTTGCGGGGATTCATTActacaagaaaaagaaaaagttactcGGAGAGACTTCTGAAGAAGACGCTGTTTTGGAGAATTTATCCAGTATGCCGATCCGTTTCAGCTATAAAGATCTTGAAGTTGCAACTAATAACTTTTCAATGAAGCTTGGTCAAGGAGGTTTCGGATCAGTTTATAAAGGAGTTCTACCTGATGGGACTCAATTAGCTGTGAAGCAACTAGAAGGCATTGGTCAAGGAAAGAAAGAGTTTAGAGCTGAAATTAACATCATTGGTAGCATTCATCACCTTAATTTGGCATTATCGCTTAGTCCATTAGCCCATTCTAGTGGCCTTTCAGAACGTGCTTTTGAAACCGTTTACCGATTGAACATAGGAGGAACCTTGCTCACTGCCGAAAATGATACATTGGGAAGGACTTGGGAGAATGATCAGAAGTATCTCTTTGTGAACAGCTCGGTTACTAATGTGTCGGCTAGTCCTTCAAGCATTAGGTATCGACCGGGCGTTACTGCTGAGACGGCACCTAATTGGGTTTATGCCACTGCTGAAGCAATGGGGAGTGCCATCAATCCAAATTTCAACATTACTTGGGTCTTTGATGTGGATCCACGTTTCTCCTATTTTGTTCGGCTTCACTTTTGCGATATTATTAGCAAAGCAATGAATACTTTAGTTTTCAATGTATTCATAAATACTGACATTGCTATTGGAAGCCTTGACTTATCATCGATGACTAATGATTTGGCTTTGCCTTACTTTAAGGACTTTGTTTCCAATGCCTCATCGGATAACACTTTGACGGTAAGCGTTGGTCCTGATACAATGGCGGACATTACAAATGCAACTATGAATGGATTGGAGATAATGAAAATCAGCAATGATTTGAAGAGCTTAGATGGAAGTGGAAGTGATGGAAGTGGAAGTAGCAATAAGCACATAATAGTTGTCATTGTCGTCATCGTCGTTGTCATATTAACTTTGTTTGTTCTGCTCTTTGCGGGGATTCAATACTacaggaaaaagaaaaagttaccTGGAGAGAATTCCGAAGAAGACACTGTTTTGGAGAATTTAGCCAATATGCCAATCCGTTTCTGCTATAAAGATCTTGAGGTTGCAACTAATAACTTCTCAATGAAGCTTGGTCAAGGAGGTTTCGGATCAGTTTATAAAGGAGTTTTACCTGATGGGACTCAAGTAGCTGTGAAGCAACTAGAAGGTATTGGTCAAGGGAAGAAAGAGTTTAGAGCTGAAATTAACATCATTGGTAGCATTCATCACCTTAATTTGGTAAGGCTTAAAGGATTTTGTGCAGATGGAACTCATAGGCTTCTAGTTTACGAGTATATGGCTAATAACTCATTAGATAAATGGAtattcaagaagaaaaaaagtgaatttcttTTGGATTGGGATACAAGGTTTAATATAGCATTAGGAACAGCAAAAGGGCTAGCTTATTTACATGAAGAATGTGACTCAAAGATTGTTCATTGTGACATCAAGCCTGAAAATATACTTTTAGATGATCATTTCATTGCAAAAGTTTCAGATTTTGGTTTAGCTAAGCTCATGACTAGACAACAAAGCCATGTTTTCACAACACTAAGAGGAACAAGAGGGTACTTAGCACCTGAGTGGATAAGAAACTGTCCTATATCAGAGAAAAGTGATGTATACAGCTATGGGATGGTTTTGCTAGAGATAATTagtggaagaaaaaattatgaTCCTAATGAGACTTCAGAGAAATTCAATTTTCCTTGTTTTGCTTTTAAGATGATGGAAGAAGGGAAAGTGAGAGATATAGTTGATTCAGAGTTGAAAATAGATTATGAGCATTATGATAAGGTTCATTGTGCTATAAGTGTTGCATTGTGGTGTATACAAGAAAACATGTCTATGAGACCTTCCATGACAAGAGTTGTTCAAATGTTAGAGGGTCTTTGCACTGTTCCTAAACCACCAAAATCCTCCAATCATGGGAACACCTCTTCTGATTCCTATCTATCAGCAGTTAGTCTTTCAGGTCCAAGATAG 3231 0.3668 MVMVKLVLVVTVIAFLVNVSFAVYTPADNYLIACGSSKSITFQDRVFVPDSQHSSLVLKTGNSIVVASSNSSVVPSPIYQSTRIFTENGSYRFDVSEGRHWIRLYFYPLPNTSHNLTSASIKVVGGDFVLLSNFTFRNYKSSYMFREYAINAISDTLTVTFIPLHGSVAFVNAIEVVSMPYDLFMGKSLSVGPLVCFSGLPESAFETIYRLNIGGTLLTAENDTLGRTWENDQKYLHVNNSVTNVSASPSRIRYQSGITNETAPNLVYATAVAMGSAINPNFNITWVFDVDPTIRSLDLSSMTNDFALPYYMDFVSNASSDNTLTVSIGPDALSDSTNASINGLEIMKISNALKGLDGSGNNGSGSGSNGSGSSNKHIIVVIVIVVVVILILFVLLFAGIHYYKKKKKLLGETSEEDAVLENLSSMPIRFSYKDLEVATNNFSMKLGQGGFGSVYKGVLPDGTQLAVKQLEGIGQGKKEFRAEINIIGSIHHLNLALSLSPLAHSSGLSERAFETVYRLNIGGTLLTAENDTLGRTWENDQKYLFVNSSVTNVSASPSSIRYRPGVTAETAPNWVYATAEAMGSAINPNFNITWVFDVDPRFSYFVRLHFCDIISKAMNTLVFNVFINTDIAIGSLDLSSMTNDLALPYFKDFVSNASSDNTLTVSVGPDTMADITNATMNGLEIMKISNDLKSLDGSGSDGSGSSNKHIIVVIVVIVVVILTLFVLLFAGIQYYRKKKKLPGENSEEDTVLENLANMPIRFCYKDLEVATNNFSMKLGQGGFGSVYKGVLPDGTQVAVKQLEGIGQGKKEFRAEINIIGSIHHLNLVRLKGFCADGTHRLLVYEYMANNSLDKWIFKKKKSEFLLDWDTRFNIALGTAKGLAYLHEECDSKIVHCDIKPENILLDDHFIAKVSDFGLAKLMTRQQSHVFTTLRGTRGYLAPEWIRNCPISEKSDVYSYGMVLLEIISGRKNYDPNETSEKFNFPCFAFKMMEEGKVRDIVDSELKIDYEHYDKVHCAISVALWCIQENMSMRPSMTRVVQMLEGLCTVPKPPKSSNHGNTSSDSYLSAVSLSGPR 1076
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g04464 1076 ProSiteProfiles Protein kinase domain profile. 772 1046 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g04464 1076 SUPERFAMILY Protein kinase-like (PK-like) 422 496 IPR011009 -
Tsu02g04464 1076 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 684 1060 - -
Tsu02g04464 1076 Gene3D Phosphorylase Kinase; domain 1 403 500 - -
Tsu02g04464 1076 Gene3D Phosphorylase Kinase; domain 1 736 846 - -
Tsu02g04464 1076 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 684 1060 - -
Tsu02g04464 1076 CDD STKc_IRAK 778 1046 - -
Tsu02g04464 1076 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 363 495 - -
Tsu02g04464 1076 ProSitePatterns Serine/Threonine protein kinases active-site signature. 893 905 IPR008271 GO:0004672|GO:0006468
Tsu02g04464 1076 ProSitePatterns Protein kinases ATP-binding region signature. 778 800 IPR017441 GO:0005524
Tsu02g04464 1076 Gene3D Transferase(Phosphotransferase) domain 1 847 1049 - -
Tsu02g04464 1076 SMART serkin_6 772 1043 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g04464 1076 Pfam Malectin-like domain 32 294 IPR024788 -
Tsu02g04464 1076 Pfam Malectin-like domain 510 688 IPR024788 -
Tsu02g04464 1076 Gene3D - 29 180 - -
Tsu02g04464 1076 Gene3D - 204 299 - -
Tsu02g04464 1076 Gene3D - 512 691 - -
Tsu02g04464 1076 MobiDBLite consensus disorder prediction 1051 1076 - -
Tsu02g04464 1076 SUPERFAMILY Protein kinase-like (PK-like) 754 1044 IPR011009 -
Tsu02g04464 1076 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 363 495 - -
Tsu02g04464 1076 MobiDBLite consensus disorder prediction 1053 1076 - -
Tsu02g04464 1076 Pfam Protein kinase domain 775 1041 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g04464 Tsu-Chr2 53564800 53568347 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g04464 22 495 Receptor kinase-like Gene Family AT2G21480 33.519 5.88e-78 273
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Tsu02g04464 Pkinase 2.7e-53 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g04464 - - gmx:100782258 582.793