Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tsu02g04464 | ATGGTGATGGTGAAACTTGTTTTGGTTGTTACTGTTATAGCATTTTTGGTAAATGTGTCATTTGCTGTATACACACCTGCAGATAATTATCTAATTGCTTGTGGTTCATCTAAAAGTATCACTTTTCAAGATCGTGTTTTCGTTCCGGATTCACAACATTCATCACTTGTGTTGAAAACTGGAAATTCAATTGTTGTTGCTAGTTCTAATTCAAGTGTTGTTCCATCTCCAATCTACCAATCAACTAGGATTTTCACTGAGAATGGTTCTTACAGATTTGATGTTTCTGAAGGTAGGCATTGGattagattatatttttatcctCTTCCAAACACTAGCCATAATTTGACTTCAGCTTCTATAAAAGTTGTTGGtggtgattttgttttgttaagcAACTTCACTTTTAGAAACTATAAAAGTTCTTATATGTTTAGGGAGTATGCTATCAATGCAATTTCTGATACTTTGACTGTAACCTTTATTCCTTTGCATGGTTCAGTTGCTTTTGTAAATGCAATTGAAGTTGTGTCGATGCCATATGACTTGTTTATGGGTAAGTCATTGTCGGTTGGTCCATTAGTCTGTTTTAGTGGCCTTCCGGAAAGTGCTTTTGAAACCATTTACCGATTGAACATAGGAGGAACCTTGCTCACTGCCGAAAACGACACGTTGGGAAGGACTTGGGAGAATGATCAGAAGTACCTCCATGTGAACAACTCAGTCACTAATGTCTCGGCTAGCCCTTCAAGAATTAGGTATCAATCGGGCATTACTAATGAGACGGCACCTAATTTGGTTTATGCCACTGCTGTAGCAATGGGGAGTGCTATCAATCCAAATTTCAACATTACTTGGGTCTTTGATGTGGATCCAACTATTCGAAGCCTTGACCTATCATCGATGACTAATGATTTCGCTCTGCCTTACTATATGGATTTTGTTTCCAATGCCTCATCGGATAACACTTTGACGGTAAGCATTGGTCCTGATGCATTGTCCGACAGTACAAATGCAAGTATAAATGGATTAGAGATAATGAAAATCAGCAATGCTTTGAAGGGCTTAGATGGAAGTGGAAATAATGGAAGTGGAAGTGGAAGTAATGGAAGTGGAAGTAGCAATAAGCACATAATAGTTGTCATTGTCATCGTCGTCGTTgtcatattaattttgtttgttctgCTCTTTGCGGGGATTCATTActacaagaaaaagaaaaagttactcGGAGAGACTTCTGAAGAAGACGCTGTTTTGGAGAATTTATCCAGTATGCCGATCCGTTTCAGCTATAAAGATCTTGAAGTTGCAACTAATAACTTTTCAATGAAGCTTGGTCAAGGAGGTTTCGGATCAGTTTATAAAGGAGTTCTACCTGATGGGACTCAATTAGCTGTGAAGCAACTAGAAGGCATTGGTCAAGGAAAGAAAGAGTTTAGAGCTGAAATTAACATCATTGGTAGCATTCATCACCTTAATTTGGCATTATCGCTTAGTCCATTAGCCCATTCTAGTGGCCTTTCAGAACGTGCTTTTGAAACCGTTTACCGATTGAACATAGGAGGAACCTTGCTCACTGCCGAAAATGATACATTGGGAAGGACTTGGGAGAATGATCAGAAGTATCTCTTTGTGAACAGCTCGGTTACTAATGTGTCGGCTAGTCCTTCAAGCATTAGGTATCGACCGGGCGTTACTGCTGAGACGGCACCTAATTGGGTTTATGCCACTGCTGAAGCAATGGGGAGTGCCATCAATCCAAATTTCAACATTACTTGGGTCTTTGATGTGGATCCACGTTTCTCCTATTTTGTTCGGCTTCACTTTTGCGATATTATTAGCAAAGCAATGAATACTTTAGTTTTCAATGTATTCATAAATACTGACATTGCTATTGGAAGCCTTGACTTATCATCGATGACTAATGATTTGGCTTTGCCTTACTTTAAGGACTTTGTTTCCAATGCCTCATCGGATAACACTTTGACGGTAAGCGTTGGTCCTGATACAATGGCGGACATTACAAATGCAACTATGAATGGATTGGAGATAATGAAAATCAGCAATGATTTGAAGAGCTTAGATGGAAGTGGAAGTGATGGAAGTGGAAGTAGCAATAAGCACATAATAGTTGTCATTGTCGTCATCGTCGTTGTCATATTAACTTTGTTTGTTCTGCTCTTTGCGGGGATTCAATACTacaggaaaaagaaaaagttaccTGGAGAGAATTCCGAAGAAGACACTGTTTTGGAGAATTTAGCCAATATGCCAATCCGTTTCTGCTATAAAGATCTTGAGGTTGCAACTAATAACTTCTCAATGAAGCTTGGTCAAGGAGGTTTCGGATCAGTTTATAAAGGAGTTTTACCTGATGGGACTCAAGTAGCTGTGAAGCAACTAGAAGGTATTGGTCAAGGGAAGAAAGAGTTTAGAGCTGAAATTAACATCATTGGTAGCATTCATCACCTTAATTTGGTAAGGCTTAAAGGATTTTGTGCAGATGGAACTCATAGGCTTCTAGTTTACGAGTATATGGCTAATAACTCATTAGATAAATGGAtattcaagaagaaaaaaagtgaatttcttTTGGATTGGGATACAAGGTTTAATATAGCATTAGGAACAGCAAAAGGGCTAGCTTATTTACATGAAGAATGTGACTCAAAGATTGTTCATTGTGACATCAAGCCTGAAAATATACTTTTAGATGATCATTTCATTGCAAAAGTTTCAGATTTTGGTTTAGCTAAGCTCATGACTAGACAACAAAGCCATGTTTTCACAACACTAAGAGGAACAAGAGGGTACTTAGCACCTGAGTGGATAAGAAACTGTCCTATATCAGAGAAAAGTGATGTATACAGCTATGGGATGGTTTTGCTAGAGATAATTagtggaagaaaaaattatgaTCCTAATGAGACTTCAGAGAAATTCAATTTTCCTTGTTTTGCTTTTAAGATGATGGAAGAAGGGAAAGTGAGAGATATAGTTGATTCAGAGTTGAAAATAGATTATGAGCATTATGATAAGGTTCATTGTGCTATAAGTGTTGCATTGTGGTGTATACAAGAAAACATGTCTATGAGACCTTCCATGACAAGAGTTGTTCAAATGTTAGAGGGTCTTTGCACTGTTCCTAAACCACCAAAATCCTCCAATCATGGGAACACCTCTTCTGATTCCTATCTATCAGCAGTTAGTCTTTCAGGTCCAAGATAG | 3231 | 0.3668 | MVMVKLVLVVTVIAFLVNVSFAVYTPADNYLIACGSSKSITFQDRVFVPDSQHSSLVLKTGNSIVVASSNSSVVPSPIYQSTRIFTENGSYRFDVSEGRHWIRLYFYPLPNTSHNLTSASIKVVGGDFVLLSNFTFRNYKSSYMFREYAINAISDTLTVTFIPLHGSVAFVNAIEVVSMPYDLFMGKSLSVGPLVCFSGLPESAFETIYRLNIGGTLLTAENDTLGRTWENDQKYLHVNNSVTNVSASPSRIRYQSGITNETAPNLVYATAVAMGSAINPNFNITWVFDVDPTIRSLDLSSMTNDFALPYYMDFVSNASSDNTLTVSIGPDALSDSTNASINGLEIMKISNALKGLDGSGNNGSGSGSNGSGSSNKHIIVVIVIVVVVILILFVLLFAGIHYYKKKKKLLGETSEEDAVLENLSSMPIRFSYKDLEVATNNFSMKLGQGGFGSVYKGVLPDGTQLAVKQLEGIGQGKKEFRAEINIIGSIHHLNLALSLSPLAHSSGLSERAFETVYRLNIGGTLLTAENDTLGRTWENDQKYLFVNSSVTNVSASPSSIRYRPGVTAETAPNWVYATAEAMGSAINPNFNITWVFDVDPRFSYFVRLHFCDIISKAMNTLVFNVFINTDIAIGSLDLSSMTNDLALPYFKDFVSNASSDNTLTVSVGPDTMADITNATMNGLEIMKISNDLKSLDGSGSDGSGSSNKHIIVVIVVIVVVILTLFVLLFAGIQYYRKKKKLPGENSEEDTVLENLANMPIRFCYKDLEVATNNFSMKLGQGGFGSVYKGVLPDGTQVAVKQLEGIGQGKKEFRAEINIIGSIHHLNLVRLKGFCADGTHRLLVYEYMANNSLDKWIFKKKKSEFLLDWDTRFNIALGTAKGLAYLHEECDSKIVHCDIKPENILLDDHFIAKVSDFGLAKLMTRQQSHVFTTLRGTRGYLAPEWIRNCPISEKSDVYSYGMVLLEIISGRKNYDPNETSEKFNFPCFAFKMMEEGKVRDIVDSELKIDYEHYDKVHCAISVALWCIQENMSMRPSMTRVVQMLEGLCTVPKPPKSSNHGNTSSDSYLSAVSLSGPR | 1076 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tsu02g04464 | 1076 | ProSiteProfiles | Protein kinase domain profile. | 772 | 1046 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Tsu02g04464 | 1076 | SUPERFAMILY | Protein kinase-like (PK-like) | 422 | 496 | IPR011009 | - | |
Tsu02g04464 | 1076 | PANTHER | G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 | 684 | 1060 | - | - | |
Tsu02g04464 | 1076 | Gene3D | Phosphorylase Kinase; domain 1 | 403 | 500 | - | - | |
Tsu02g04464 | 1076 | Gene3D | Phosphorylase Kinase; domain 1 | 736 | 846 | - | - | |
Tsu02g04464 | 1076 | PANTHER | G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 | 684 | 1060 | - | - | |
Tsu02g04464 | 1076 | CDD | STKc_IRAK | 778 | 1046 | - | - | |
Tsu02g04464 | 1076 | PANTHER | G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 | 363 | 495 | - | - | |
Tsu02g04464 | 1076 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 893 | 905 | IPR008271 | GO:0004672|GO:0006468 | |
Tsu02g04464 | 1076 | ProSitePatterns | Protein kinases ATP-binding region signature. | 778 | 800 | IPR017441 | GO:0005524 | |
Tsu02g04464 | 1076 | Gene3D | Transferase(Phosphotransferase) domain 1 | 847 | 1049 | - | - | |
Tsu02g04464 | 1076 | SMART | serkin_6 | 772 | 1043 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Tsu02g04464 | 1076 | Pfam | Malectin-like domain | 32 | 294 | IPR024788 | - | |
Tsu02g04464 | 1076 | Pfam | Malectin-like domain | 510 | 688 | IPR024788 | - | |
Tsu02g04464 | 1076 | Gene3D | - | 29 | 180 | - | - | |
Tsu02g04464 | 1076 | Gene3D | - | 204 | 299 | - | - | |
Tsu02g04464 | 1076 | Gene3D | - | 512 | 691 | - | - | |
Tsu02g04464 | 1076 | MobiDBLite | consensus disorder prediction | 1051 | 1076 | - | - | |
Tsu02g04464 | 1076 | SUPERFAMILY | Protein kinase-like (PK-like) | 754 | 1044 | IPR011009 | - | |
Tsu02g04464 | 1076 | PANTHER | G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 | 363 | 495 | - | - | |
Tsu02g04464 | 1076 | MobiDBLite | consensus disorder prediction | 1053 | 1076 | - | - | |
Tsu02g04464 | 1076 | Pfam | Protein kinase domain | 775 | 1041 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Tsu02g04464 | Tsu-Chr2 | 53564800 | 53568347 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Tsu02g04464 | 22 | 495 | Receptor kinase-like Gene Family | AT2G21480 | 33.519 | 5.88e-78 | 273 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_SD-2b | Tsu02g04464 | Pkinase | 2.7e-53 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tsu02g04464 | - | - | gmx:100782258 | 582.793 |