Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g04451 ATGACAATGCAGTTTGATGAAGTTGTGTacaaaatcaaagacaaaaaagGAGGAATAtttaagaagaaaacaaaagtaGAAGAGAAAACAATACTAAAAGGAGTAACAGGAATTGTTAAACCAGGTGAAATGTTAGCAATGTTAGGTCCATCAGGAAGTGGAAAAACAACATTGTTAACAGCATTAGGAGGAAGACTTGGTGGAAAACtttatggaaaaataacatacaatgaaaaaccattttcaaattcaataaaaagAAACACAGGTTTTGTTACACAAGATGATGTTCTTTACCCTCATTTAACAGTAACAGAAACACTTGTTTTTACAGCACTTTTAAGATTACCAAATACTGTTACTAAAGACGAGAAAGTTTTGCATGCGAAAAATGTTATTGATCAACTTGGTTTAACAAAGTGTAAAGATAGCATTGTTGGTAGTGCATATTTAAGAGGTGTTTCTGGTGGAGAAAGGAAAAGAGTTAGTATTGGACAAGAATTGCTTATAAATCCTAGTTTATTGTTTCTTGATGAACCTACTTCTGGTTTGGATTCTACAACGGCTCAAAGGATTGTATCGACTTTGTGGGATTTAGCGAGAGGTGGAAGGACTGTTGTGATGACAATACATCAACCTTCAAGTagattatattatatgtttcaTAAAGTTTTGTTGCTTGCAGAAGGGAATGTTGTTTATTTTGGAAAAGGTTCTGAAGCTATTgaatatttttctaatattgGTTATTCTCCTGCTATGGCTATGAACCCTTCAGATTTCCTTTTGGATCTCGCAAATgGTATCTACACCGATGACATGAATCATGACCATAACATAGACAAGCAAAAACTGATTTCAGCGTTTAAAAGTAACTCTGAAACACAGTCGAAACAAGAAGAACAACAAGAAATCAATGACTCTGATACAAGTCAGGGTAGATTTCAAGAGACAAGTTCTGGAAAATGGCCTACAAGTTGGTCACAACAATTCTTTGTATTGTTAAGAAGAGATGTCAAAGAGAGAAAATATGAATCATTCTCTGGCTTGAGGATTGGTCAAGTCCTTGTGGTTGCACTTATGTCAGGATTACTTTGGTATAAATCTGATATGTCACACTTGCAGGATCAGATTGGACTACTATTCTTCATAACAGGCTTTTGGGGTTTTTTCCCTCTCTTCCAAGCAATCTTCACCTTCCCACAAGAACTAATGATGCTCGAAAAAGAAAGATCTTCCGGAATGTATAGACTCTCCTCCTACTTCATTTCAAGAATGGTAGCTGACCTACCAATGGAACTAGTCCTCCCAACAATTTTCCTTCTCATAACATATTTCATGGCAGGACTCAAAGCAACAATGATAAACTTTTTTCAAACACTTTTCAGTCTCTTACTCAATGTCTTAGTTGCACAAGGATTAGGACTTGCTCTTGGCGCCGTTGTACTTGATCAAAAATCGGCAACAACACTTGCATCAGTAATCATGCTATGTTTCTTACTTGCTGGTGGATTTTATGTTCAAAATGTTCCAAAGTTTATTGCATGGGTGAAGTATATTTCTATAAGCTACTATACATATCAACTATTTATTGGATCACAATATCATAGTGGTGAGACATACCCTTGTTCTAGTGGACAGTGTCCTATTGAAGAGTTTCCTCCAATAAAACAAATGGGGTTTGATATGAATGGACAAGGATTGGCTGCAATGGCTCTTGTTATAATGTTAATTGGTTATagacttatagcttatattgCTCTTATGAGGATTGGAGTCACAAAGAAAAAGGCTTAG 1797 0.3356 MTMQFDEVVYKIKDKKGGIFKKKTKVEEKTILKGVTGIVKPGEMLAMLGPSGSGKTTLLTALGGRLGGKLYGKITYNEKPFSNSIKRNTGFVTQDDVLYPHLTVTETLVFTALLRLPNTVTKDEKVLHAKNVIDQLGLTKCKDSIVGSAYLRGVSGGERKRVSIGQELLINPSLLFLDEPTSGLDSTTAQRIVSTLWDLARGGRTVVMTIHQPSSRLYYMFHKVLLLAEGNVVYFGKGSEAIEYFSNIGYSPAMAMNPSDFLLDLANGIYTDDMNHDHNIDKQKLISAFKSNSETQSKQEEQQEINDSDTSQGRFQETSSGKWPTSWSQQFFVLLRRDVKERKYESFSGLRIGQVLVVALMSGLLWYKSDMSHLQDQIGLLFFITGFWGFFPLFQAIFTFPQELMMLEKERSSGMYRLSSYFISRMVADLPMELVLPTIFLLITYFMAGLKATMINFFQTLFSLLLNVLVAQGLGLALGAVVLDQKSATTLASVIMLCFLLAGGFYVQNVPKFIAWVKYISISYYTYQLFIGSQYHSGETYPCSSGQCPIEEFPPIKQMGFDMNGQGLAAMALVIMLIGYRLIAYIALMRIGVTKKKA 598
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g04451 598 ProSitePatterns ABC transporters family signature. 154 168 IPR017871 GO:0005524
Tsu02g04451 598 Gene3D - 21 248 IPR027417 -
Tsu02g04451 598 MobiDBLite consensus disorder prediction 291 323 - -
Tsu02g04451 598 Pfam ABC transporter 32 182 IPR003439 GO:0005524
Tsu02g04451 598 SMART AAA_5 41 239 IPR003593 -
Tsu02g04451 598 PANTHER ABC TRANSPORTER G FAMILY MEMBER 21 2 592 - -
Tsu02g04451 598 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 27 247 IPR027417 -
Tsu02g04451 598 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 2 592 - -
Tsu02g04451 598 Pfam ABC-2 type transporter 329 535 IPR013525 GO:0016020|GO:0140359
Tsu02g04451 598 CDD ABCG_EPDR 31 236 - -
Tsu02g04451 598 MobiDBLite consensus disorder prediction 308 323 - -
Tsu02g04451 598 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 3 254 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g04451 Tsu-Chr2 53384027 53386914 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g04451 31 268 Calmodulin-binding Proteins AT2G36910 26.423 2.79e-11 65.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g04451 K05681 - gmx:100816135 897.886
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g04451 02 53384027 53386914 Tsu02g04451 02 53384027 53386914 ECH