Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g04447 ATGACATCGGATGTTTGTGATTGGCCTTTGGAGTTTCTTAAAGATTACACTTCTATATGCGAAGATAATgaatatgtaaatgattttaCATTTCAAGTGCCACAACAAGAACCATTGCCTCAAGCCAATACCATTAATGAGGGGGATCCTTTTGAAGGACAAATATTTAACAATGATGATGAGGCTTATGAATTTTACTCTGTATTTGCTCGAAAAAATGGATTTTCGATTCGGCGTGATCACATTTACAAGTCTCGTAAAAATGAGTCCGAGGATAATCCATTAGGAGTTTATAAGAGAGAATTTGTTTGTCATCGAGCTGATATTGTTAAACAACGCAAAGTTGATGACGTGGAAAGTCAGAGGAAACGAAAATCTTCAAGATGTAGTTGTAGTGCAAAGATGTTGGTTACTAAAAGAACAATTGGTTTTGAAGAACAATGGGTGGTTACACATTTCAGTAATGACCACAATCATGAGTTATTAGATGACAAGGAGGTCCAATTTCTTCCTGCTTATTGTAACATCTCAATCGTCGATCAAAATCGTATACATTTGTTATCAAAAGCTAGTTGTTCCGTGAGTCTCATAATGAGAGTGCTGGAGTTAGAGAAAGGAATAAATACAGGAAACCTACCTtttttggagaaagatattagaaattttattcaatcTCATAGTGGTATTGGTCAAGAAAATGATGCTTCAAATGTTCTCAAATTATGCAAAAGTTTGAAAGATATGGATGACACCTTCAAATATGATTTCACAATAGATGAAAGCAACAAATTGGAGATGTGGTTGTTTTTGATACCACATATCAAATAA 828 0.3285 MTSDVCDWPLEFLKDYTSICEDNEYVNDFTFQVPQQEPLPQANTINEGDPFEGQIFNNDDEAYEFYSVFARKNGFSIRRDHIYKSRKNESEDNPLGVYKREFVCHRADIVKQRKVDDVESQRKRKSSRCSCSAKMLVTKRTIGFEEQWVVTHFSNDHNHELLDDKEVQFLPAYCNISIVDQNRIHLLSKASCSVSLIMRVLELEKGINTGNLPFLEKDIRNFIQSHSGIGQENDASNVLKLCKSLKDMDDTFKYDFTIDESNKLEMWLFLIPHIK 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g04447 275 Pfam FAR1 DNA-binding domain 64 162 IPR004330 -
Tsu02g04447 275 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 33 267 IPR031052 GO:0006355
Tsu02g04447 275 PANTHER PROTEIN FAR1-RELATED SEQUENCE 11 33 267 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g04447 Tsu-Chr2 53351605 53352432 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Tsu02g04447 FAR1 2.8e-19 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g04447 - - ccaj:109802755 370.163