Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g04416 ATGGAGAAGAAATCACTTGCTGCCTTGTCCTTCCTCTTCCTCGTTCTCTTTGTTACACAAGAAATTGTGGTGACTGAGGCCAAAACATGTGAGAATTTGGCTGGCAAATACAAGGGAGTATGCTTTGGTGGGTGTGACACTCACTGCACAACCCAAGAGGGTGCAATTAGTGGCAGATGCAGGGATGATTTTCGTTGTTGGTGCactaaaaaatgttaa 219 0.4338 MEKKSLAALSFLFLVLFVTQEIVVTEAKTCENLAGKYKGVCFGGCDTHCTTQEGAISGRCRDDFRCWCTKKC 72
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g04416 72 Pfam Gamma-thionin family 28 72 - -
Tsu02g04416 72 Gene3D - 28 72 IPR036574 -
Tsu02g04416 72 PANTHER DEFENSIN 1 72 - -
Tsu02g04416 72 PANTHER DEFENSIN-LIKE PROTEIN 1 1 72 - -
Tsu02g04416 72 SUPERFAMILY Scorpion toxin-like 32 70 IPR036574 -
Tsu02g04416 72 SMART gth_4 29 72 IPR003614 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g04416 Tsu-Chr2 52955695 52956817 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g04416 1 72 Plant Defensins Gene Families AT5G63660 39.474 8.90e-09 45.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g04416 - - gmx:100779239 107.842