Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g04412 ATGGGGAAGAATTCACTTGCTGCCTTGTCCTTCCTCTTCCTTGTTCTCTTTGTTGCACAAGAAATTGTGGTGACTGAGGCACAAAACAAATGTGAGCATTTGGCTGATACATATAGAGGACCATGCTTCACTAATGCTAGCTGTGATGATCACTGCAAGAACAAAGAGCATTTTCGTAGTGGCACTTGCCATAACCTTCAATGTTGGTGCActcataaaaaatgttaa 228 0.3991 MGKNSLAALSFLFLVLFVAQEIVVTEAQNKCEHLADTYRGPCFTNASCDDHCKNKEHFRSGTCHNLQCWCTHKKC 75
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g04412 75 CDD Knot1 40 71 IPR003614 GO:0006952
Tsu02g04412 75 Pfam Gamma-thionin family 31 72 - -
Tsu02g04412 75 PANTHER DEFENSIN-LIKE PROTEIN 1 1 72 - -
Tsu02g04412 75 SUPERFAMILY Scorpion toxin-like 30 72 IPR036574 -
Tsu02g04412 75 Gene3D - 29 75 IPR036574 -
Tsu02g04412 75 SMART gth_4 30 75 IPR003614 GO:0006952
Tsu02g04412 75 PANTHER DEFENSIN 1 72 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g04412 Tsu-Chr2 52909424 52910462 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g04412 7 73 Plant Defensins Gene Families AT1G61070 33.333 1.37e-07 42.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g04412 - K16669 gmx:100779239 102.064