Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g04379 aTGAAACTTCATAAACATATTTGCTTATTCTTGTTTCTCTTTAGTTTAATTTCAAGCTCACAAGCCTATACATTCTATGTTGGTGGAAAAGATGGATGGGTTTTGAACCCCTATGAAAGTTACAATGAATGGACAGGGAGAAATAGGTTCCAAGTCAATGATATTCTTGTTTTTAAGTATAAGAAGGACTCAAATTCAGTGTTGGTAGTGAACAAAGAGGATTATGATAAGTGCAACAAGAAAAATCCAATCAAGAAATTTGATGATGGTGATTCTGAGCTCCAATTGGATAGATCTGGtccattttatttcattagtgGAAAAGATGATAATTGTGAAAAAGGTCAAAAATTAATTGTTGTGGTTTTGGCTGTTAGAAAAAGATCTCCTCCCCATGTTCCGATTATTCCACCAAATGTTCCTTATACACCTCCCAAAAGTACTCCTTCACCTGGCAATCAACCTCCGTATGTTCCAATTACACCTACTCCTGTTCACAATCCTCCTAGTGTTCCTTATACTCCTCCGAAAACACCTTCTCCAGGGAATGAGTCACCGTATGTACCAATTACACCACCAAAAACACCTCCTACTCACACTCCTCCTAGTGTTCCATATACTCCACCAAAAACTCCTTCTCCAGGAAATGAGCCACCGTATGTACCAATTACACCACCAAAAACACCTTCCCCTGTTCACACGCCACCTAGTGTTCCATATACTCCTCCAAAAACTCCTTCTCCAATTCACACACCTCCTAGTGTTCCTTATACTCCACCAAAAGCTCCTTCTCCTGGAAATGATGTTCCATACACACCTCCAATAACTCCTTCTCCAATTCACACCCCTCCTAGTGTTCCTTATACTCCACCAAAAGTTCCTTCTCCTGGAAATGAGTCACCGTATGTACCAGTTACACCACCAAAAACACCTACCCCTGTTCACACACCTCCTAGTGTTCCATTTACACCTCCAAAAAATCCTTCTCCAATTCACACCCCTCCTAGTGTTCCTTATACTCCACCAAAAGCTCCTTCTCCTGGAAATGAGTCACCGTATGTACCTGTTACACCACCAAATACACCTTCCCCTATTCACACACCTCCCAGTATTCCTTATACTCCACCAAAAACTCCTTCTCCTGGAAATGAGTCACCGTATGTACCAGTAACACCTCCAAAAACACCTTCCCCCATTCACACCCCTCCTAGTGTTCCAAACACTCCACCAAAAGCTCCTTCTCCTAAAAATGAGCCGCCATATGTACCGATTACACCACCAAAAACACCTTCTCCTATTCACACCCCTCCTAGTATTCCATATACACCTCCAAAAACTCCTTCTCCAATTCACACCCCTCCTAGTGTTCCATACACTCCACCAAAAGCTCCTTCTCCTGGGAATGAGTCACCATATGTACCAATTACACCACCAAAAACACCTACTCCTATCCACACCCCTCCTAGTGTTCCTTATACCCCTCCAGGAACACCTTCTCCTATCCACAGCCCTCCTAATGTTCCTTATACTCCCCCAAAAGCACCTTCTCCTAGGAACCAACCACCGTATGTACCAATTACACCACCAAATACACCGTCTCCTACTCAAACCCCTCCCAATGTTCCTTATACTCCACCAAAATCTCCTTCTCCTGGAAATGAATCACCATATGTACCAATAACACCACCGAAAAGTCCTTCTCCTATTCATAGCCCTCCTAATGTTCCTTACACTCCACCAAAAACTCCTTCTCCTAGCAATCAACCACCCTATGTACCAATTACACCACCGAAAACCCCTTCGCCTATACACGCCCCTCCCAATGTTCCTTATACTCCTCCAGAATCTCCTACCCCAAAAAATCAACCACCTTATGTTCCAATTACACCTCCAAAAACTCCTTCCCCTACTTCCAATCCTATTCCTCCTAGTAATTCTCCTTACACTCCCCCTAAAACTCCATCCCCTAGAAATCAACCACCGTATATGCCAAATCCTCCAAAAACCCCTTCTCCAATCTCTCAACCACCCTATGTACCAATTACACCACCCAAATCTCCGTCTCCTATTTACACTCCTCCTAATGTTCCTTACATACCTCCAATAACTCATGCCCCTAGCAATCACCCTCCAAATATTCCAACAACACCTTCTCCTATTGCTCAACCCCCATATGTTCCAACACCTCCAAAAACACCTTCACCGATTTCTCAAGCACCTTCCATTGAAACACCTCCCAACACTCCAATAGCTCCTTCCCCAAGCAATCACCCTCCAAATGTACCAAAATCTCCACAAATACCTTCTCCTATTTCTCAACCTCCATATTTTCCAACACCTCCAAAAACACCATCTCCCATTTCTCAAGCCCCTTACATTCAAACACCACCAAACACACCTTCACCAACATCACAACCACCATACACTCAAACTCCTCGAAGCACTCCTTCTTCACCAACATCACAACCACCTTACATTTCAACACCTCCGGAGAGTACTCCATCTCCATCTTCTCACACACCTCAAGGTGCTCTTTCTCCAATTTCACAGCCTCCATATATTCAAACACCACCAAATTCGCATTCACCAACCTCTCAACCACCTTACATTCAAACACCACCAAGCACCTCTTCTCCATCATCTTCCCCATCATCAGCACAAACTCCTTCTGGAAGTGGAATATCACCATCTCCACTATCTCCATATCCATCCAACAACTCAACATCACCTTCAACTTCACCTTCGGCGAGTTCACCGTCATCAACCACTACTTCACCTCCGGCTCTCACTCCCGCGAGTTCTCCGGTGTCAACCCCTACTTCACCTCCAGCTCTTGCTCCAACGGGTTCTCCAGTGTCAGCCACTACTCCAACAACATCTCCTGTGGGGTCTCCTCTGTCAGCATCAACTCCGTCACCATCATCCACTGTATCTGGAACATCGGGAAATCTATCACCATCGTCCACCCCTGTAGGAACGCCTTCTGCATCGAATGAAACATCAGCGGGGCGGACAACAAGCGGAGTATCGTCTGCTAGTCCACGGGGGATATGGACTTACTCCATTACGGTTTTGGTCGGTGCTGCACTCACCAGTACTATTCTTGGatag 3111 0.4465 MKLHKHICLFLFLFSLISSSQAYTFYVGGKDGWVLNPYESYNEWTGRNRFQVNDILVFKYKKDSNSVLVVNKEDYDKCNKKNPIKKFDDGDSELQLDRSGPFYFISGKDDNCEKGQKLIVVVLAVRKRSPPHVPIIPPNVPYTPPKSTPSPGNQPPYVPITPTPVHNPPSVPYTPPKTPSPGNESPYVPITPPKTPPTHTPPSVPYTPPKTPSPGNEPPYVPITPPKTPSPVHTPPSVPYTPPKTPSPIHTPPSVPYTPPKAPSPGNDVPYTPPITPSPIHTPPSVPYTPPKVPSPGNESPYVPVTPPKTPTPVHTPPSVPFTPPKNPSPIHTPPSVPYTPPKAPSPGNESPYVPVTPPNTPSPIHTPPSIPYTPPKTPSPGNESPYVPVTPPKTPSPIHTPPSVPNTPPKAPSPKNEPPYVPITPPKTPSPIHTPPSIPYTPPKTPSPIHTPPSVPYTPPKAPSPGNESPYVPITPPKTPTPIHTPPSVPYTPPGTPSPIHSPPNVPYTPPKAPSPRNQPPYVPITPPNTPSPTQTPPNVPYTPPKSPSPGNESPYVPITPPKSPSPIHSPPNVPYTPPKTPSPSNQPPYVPITPPKTPSPIHAPPNVPYTPPESPTPKNQPPYVPITPPKTPSPTSNPIPPSNSPYTPPKTPSPRNQPPYMPNPPKTPSPISQPPYVPITPPKSPSPIYTPPNVPYIPPITHAPSNHPPNIPTTPSPIAQPPYVPTPPKTPSPISQAPSIETPPNTPIAPSPSNHPPNVPKSPQIPSPISQPPYFPTPPKTPSPISQAPYIQTPPNTPSPTSQPPYTQTPRSTPSSPTSQPPYISTPPESTPSPSSHTPQGALSPISQPPYIQTPPNSHSPTSQPPYIQTPPSTSSPSSSPSSAQTPSGSGISPSPLSPYPSNNSTSPSTSPSASSPSSTTTSPPALTPASSPVSTPTSPPALAPTGSPVSATTPTTSPVGSPLSASTPSPSSTVSGTSGNLSPSSTPVGTPSASNETSAGRTTSGVSSASPRGIWTYSITVLVGAALTSTILG 1036
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g04379 1036 ProSiteProfiles Phytocyanin domain profile. 23 124 IPR003245 GO:0009055
Tsu02g04379 1036 PANTHER EARLY NODULIN-LIKE PROTEIN 2 1 269 - -
Tsu02g04379 1036 MobiDBLite consensus disorder prediction 851 874 - -
Tsu02g04379 1036 SUPERFAMILY Cupredoxins 22 123 IPR008972 -
Tsu02g04379 1036 Gene3D - 21 126 IPR008972 -
Tsu02g04379 1036 CDD OsENODL1_like 23 123 IPR041846 -
Tsu02g04379 1036 MobiDBLite consensus disorder prediction 875 931 - -
Tsu02g04379 1036 MobiDBLite consensus disorder prediction 932 946 - -
Tsu02g04379 1036 MobiDBLite consensus disorder prediction 132 836 - -
Tsu02g04379 1036 MobiDBLite consensus disorder prediction 947 1014 - -
Tsu02g04379 1036 Pfam Plastocyanin-like domain 34 116 IPR003245 GO:0009055
Tsu02g04379 1036 MobiDBLite consensus disorder prediction 132 1014 - -
Tsu02g04379 1036 PANTHER BLUE COPPER PROTEIN 1 269 IPR039391 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g04379 Tsu-Chr2 52472787 52476388 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g04379 1 126 Phytocyanin Superfamily AT4G27520 58.268 7.20e-50 178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g04379 - - cam:101495711 603.594
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g04379 02 52472787 52476388 Tsu02g04379 02 52472787 52476388 ECH