Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tsu02g04368 | ATGGTGTTACTTAGAAGTTTCTTGTTGACACTATTTCAATGTTGTGTCTTAtcttggtttttttgtttgtctttgaGTCTTGACAATGGAACAAAATCATGTAATCCCAGTGATTTAGCAGCTCTTAAGGATTTTGCAGGAAACCTTACAAATGGTTCAATTGTGAAAGCATGGTCTAATGATAGTGTTTGTTGCAATTGGATTGGAGTTTTTTGTGGTGATAATAATGGTGAATCTGTTAATAGAGTGACAAAGTTGATCCTTTCTGAGATGAGTCTAAATGGAACAATTTCACCTTCTTTAGCAAAACTTGATCAACTCAATGTGTTGAATCTTTCATTCAATCATCTTGAGGGTAAATTGCCTTCAGAATTTTCCAACTTGAAGATGTTGAAGTTTCTTGATTTGAGCTATAACATGTTATCAGGACCTGTTGCTGATGCAATTTCTGGTTTGGATTCCATTGAAGTGTTGAATATTTCAAGCAATTCATTTTCTGAAGAGTTTTTTCATCTTGTGGAATTTCCACATCTACTTGCTCTCAATGTGAGTAACAATTCATTCACAGGTAGATTCAGTTCTCGACTTTGCAATTCTTCTAAGAATCTTCACACACTTCATTTATCTTCAAACAATTTTGATGGTAATCTTGAAAGTTTGAACAACTGTAACAAATCTCTTCAAAGGTTGCATTTGGATTCAAATTCATTTTCTGGCCCTTTACCAGATTCTTTGTATTCAATGTTAGCCTTGGAGCAATTATCACTCTCTGGCAACAATTTTTCTGGCCAATTAAGCAATGAGTTAAGTAAGCTTTCTAGCCTAAAATCTCTTGTGGTTTCTGCAAACCGTTTTTCAGGCGAAATTCCAAATGTTTTTGAGAACTTTTTGCAGTTAGAACAATTTGTAGGACATGCAAATTCATTTTCTGGATCATTACCTTCCACTTTGGCTTTTTGCACTAAGCTTAGAGTTCTTGATCTTAAGAATAATTCATTGTCAGGTTCAATTGATCTTAATTTCACTGGTTTGTCCAATCTTTGTTCACTCGATCTTGCTAGTAATCATTTTACCGGACCACTTCCGAGTTCATTGTCCTATTGTCATGAATTGAAAGTTTTAAGCCTTGCTAGGAATGGTTTAAATGGTTCTATACCTGAAAGCTATGCCAAATTATCTTCTCTTTTGTTTGTGTCATTTTCAAACAATAGTTTAGAAAATTTATCTGGTGCACTTTCTGTTCTTCAGAAGTGCAAAAACCTCACAACTCTAATCCTCACTAAGAATTTCCGCGGCGAAGAAATTCCGCAAAGTGTACCATCAACAGGATTTGAGAGTCTTATGGTGTTAGCACTTGGAAACTGTGGTCTTAAAAGTTATATTCCTTCTTGGCTATTAAAATGCAAGAAATTGGCGGTACTTGATTTGTCTTGGAACTCATTGAATGGTAGTATTCCTTCGTGGATCGGTGAAATGGACAGTTTGTTCTATTTGGATTTCTCGAACAATTCTCTCACGGGAGAAATACCAAAAAGTTTGACAGAGTTGAAGGGATTGGTTTGTTCAAAATGTGGAAGACCGAATTTTGCTTCTTATGCTTTCATTCCTCTCTTTGTGAAGAGAAATACTAGTGCTAGTGGTTTGCAATATAATCAAGCTTCAAGTTTCCCTCCTTCAATTTTATTGAGCAATAACATGTTAAATGGAAGTATATGGCCCGAAATCGGTAACTTGAAGGCACTTCATGTGATGGATTTCAGCAGGAACAATATCAGCGGCAAAATTCCGAGTAGTATTTCAGCGATGGAGAATTTGGAAACATTGGATTTATCTTATAATGATCTATCTGGAACAATCCCTCCTTCATTTAATAACCTCACATTCTTGTCAAAGTTCAGTGTGGCGCATAATCACTTGCAAGGACCGATTCCAAGTGGAGGGCAGTTTCTAGGCTTCCCTAGTTCAAGCTTTGAGGGTAATTTGGGACTTTGCAGGGACATTGATATTGATAGTACTCGATGCAAAGTTGTTAACAACATGAGACCAAGTTTATCTTCTGGTTCGTCGAAAAAAATTAGTAGAAGCAGTGTAGTTGGCATTACAATCAGCATAGGGATAGGGCTTGCTTTGTTGCTTGCAGTTATTGTGCTAAGAATGTCGAAGAGGGAAGAAGATAAACCTATTGATAACTTTGACGAGGAGATGAATACTAGGAGGTCACACAGGTTATCGTCTGAAGCATTTGTTTCATCTAAATTGGTGCTTTTTCAGAATTCAGATTGCAAGGATCTCACAGTTTCTGATTTGTTAAAAGCAACAAACAATTTCAACCAGGCAAACATTGTTGGATGTGGTGGCTTTGGTCTTGTTTACAAGGCGTATCTTCCGAATGGCATGAAAGCGGCTGTCAAGAGGCTTTCTGGCGACTGTGGTCAGATGGAACGTGAGTTCCAAGCCGAAGTTGAAGCCCTCTCGAGAGCTCAACACAAGAACCTTGTTTCTCTTAAAGGCTATTGTCGGCATGGCAATGACAGATTGCTAATTTACTCGTATATGGAGAATGGTAGCTTGGATTATTGGCTTCATGAGTGTGTGGATGGAAATTCAGCTCTGAAATGGGATATACGACTCAAGATTGCACAAGGCTCGGCTCGTGGATTAGCTTACTTGCACAAGGGGTGTGAACCGTTCATAGTCCACCGCGACGTTAAATCTAGCAACATACTTTTGGATGATAAATTTGAAGCTCATTTGGCCGATTTTGGTCTCTCAAGACTACTTTCACCGTACGATACTCATGTCACAACAGACTTAGTAGGAACTTTAGGGTATATTCCTCCAGAATATAGTCAGACACTGACAGCAACATTCCGCGGTGATGTCTATAGTTTTGGTGTTGTTCTTCTCGAGCTTCTTACCGGTAGAAGGCCTGTGGAAGTCATCAAGGGCAAAAATTGCAGGAACTTGGTATCCTGGGTTTATCAGATGAAATATGAAAAGAAGGAGCAAGAAATTTTCGATCAAGCCATTTGGGAAAAGGAGAGGGAGAAACAACTATTGGAGGTTCTCGGCATTGCTTGTAAATGTCTAGACCAAGATCCAAGACAAAGACCTTCTATTGAAATGGTTGTTTCATGGCTTGATAATGTAAGATTTGATGGCATTCAACAATGA | 3174 | 0.3781 | MVLLRSFLLTLFQCCVLSWFFCLSLSLDNGTKSCNPSDLAALKDFAGNLTNGSIVKAWSNDSVCCNWIGVFCGDNNGESVNRVTKLILSEMSLNGTISPSLAKLDQLNVLNLSFNHLEGKLPSEFSNLKMLKFLDLSYNMLSGPVADAISGLDSIEVLNISSNSFSEEFFHLVEFPHLLALNVSNNSFTGRFSSRLCNSSKNLHTLHLSSNNFDGNLESLNNCNKSLQRLHLDSNSFSGPLPDSLYSMLALEQLSLSGNNFSGQLSNELSKLSSLKSLVVSANRFSGEIPNVFENFLQLEQFVGHANSFSGSLPSTLAFCTKLRVLDLKNNSLSGSIDLNFTGLSNLCSLDLASNHFTGPLPSSLSYCHELKVLSLARNGLNGSIPESYAKLSSLLFVSFSNNSLENLSGALSVLQKCKNLTTLILTKNFRGEEIPQSVPSTGFESLMVLALGNCGLKSYIPSWLLKCKKLAVLDLSWNSLNGSIPSWIGEMDSLFYLDFSNNSLTGEIPKSLTELKGLVCSKCGRPNFASYAFIPLFVKRNTSASGLQYNQASSFPPSILLSNNMLNGSIWPEIGNLKALHVMDFSRNNISGKIPSSISAMENLETLDLSYNDLSGTIPPSFNNLTFLSKFSVAHNHLQGPIPSGGQFLGFPSSSFEGNLGLCRDIDIDSTRCKVVNNMRPSLSSGSSKKISRSSVVGITISIGIGLALLLAVIVLRMSKREEDKPIDNFDEEMNTRRSHRLSSEAFVSSKLVLFQNSDCKDLTVSDLLKATNNFNQANIVGCGGFGLVYKAYLPNGMKAAVKRLSGDCGQMEREFQAEVEALSRAQHKNLVSLKGYCRHGNDRLLIYSYMENGSLDYWLHECVDGNSALKWDIRLKIAQGSARGLAYLHKGCEPFIVHRDVKSSNILLDDKFEAHLADFGLSRLLSPYDTHVTTDLVGTLGYIPPEYSQTLTATFRGDVYSFGVVLLELLTGRRPVEVIKGKNCRNLVSWVYQMKYEKKEQEIFDQAIWEKEREKQLLEVLGIACKCLDQDPRQRPSIEMVVSWLDNVRFDGIQQ | 1057 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tsu02g04368 | 1057 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 898 | 910 | IPR008271 | GO:0004672|GO:0006468 | |
Tsu02g04368 | 1057 | ProSiteProfiles | Leucine-rich repeat profile. | 604 | 626 | IPR001611 | GO:0005515 | |
Tsu02g04368 | 1057 | PANTHER | PHYTOSULFOKINE RECEPTOR 2 | 460 | 516 | - | - | |
Tsu02g04368 | 1057 | PANTHER | PHYTOSULFOKINE RECEPTOR 2 | 560 | 617 | - | - | |
Tsu02g04368 | 1057 | PANTHER | PHYTOSULFOKINE RECEPTOR 2 | 32 | 164 | - | - | |
Tsu02g04368 | 1057 | Pfam | Leucine Rich Repeat | 604 | 626 | IPR001611 | GO:0005515 | |
Tsu02g04368 | 1057 | Pfam | Protein kinase domain | 777 | 1045 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Tsu02g04368 | 1057 | ProSiteProfiles | Protein kinase domain profile. | 776 | 1052 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Tsu02g04368 | 1057 | Pfam | Leucine rich repeat N-terminal domain | 36 | 72 | IPR013210 | - | |
Tsu02g04368 | 1057 | ProSitePatterns | Protein kinases ATP-binding region signature. | 782 | 804 | IPR017441 | GO:0005524 | |
Tsu02g04368 | 1057 | SMART | serkin_6 | 776 | 1047 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Tsu02g04368 | 1057 | PANTHER | PHYTOSULFOKINE RECEPTOR 2 | 615 | 1050 | - | - | |
Tsu02g04368 | 1057 | PANTHER | PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA | 281 | 439 | - | - | |
Tsu02g04368 | 1057 | PANTHER | PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA | 615 | 1050 | - | - | |
Tsu02g04368 | 1057 | PANTHER | PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA | 32 | 164 | - | - | |
Tsu02g04368 | 1057 | PANTHER | PHYTOSULFOKINE RECEPTOR 2 | 281 | 439 | - | - | |
Tsu02g04368 | 1057 | PANTHER | PHYTOSULFOKINE RECEPTOR 2 | 177 | 281 | - | - | |
Tsu02g04368 | 1057 | SUPERFAMILY | L domain-like | 211 | 510 | - | - | |
Tsu02g04368 | 1057 | Gene3D | Ribonuclease Inhibitor | 305 | 678 | IPR032675 | - | |
Tsu02g04368 | 1057 | PRINTS | Leucine-rich repeat signature | 131 | 144 | - | - | |
Tsu02g04368 | 1057 | PRINTS | Leucine-rich repeat signature | 602 | 615 | - | - | |
Tsu02g04368 | 1057 | SUPERFAMILY | L domain-like | 34 | 301 | - | - | |
Tsu02g04368 | 1057 | CDD | STKc_IRAK | 782 | 1049 | - | - | |
Tsu02g04368 | 1057 | Gene3D | Phosphorylase Kinase; domain 1 | 734 | 851 | - | - | |
Tsu02g04368 | 1057 | SMART | LRR_typ_2 | 104 | 127 | IPR003591 | - | |
Tsu02g04368 | 1057 | SMART | LRR_typ_2 | 272 | 295 | IPR003591 | - | |
Tsu02g04368 | 1057 | SMART | LRR_typ_2 | 344 | 368 | IPR003591 | - | |
Tsu02g04368 | 1057 | SMART | LRR_typ_2 | 602 | 625 | IPR003591 | - | |
Tsu02g04368 | 1057 | SMART | LRR_typ_2 | 392 | 415 | IPR003591 | - | |
Tsu02g04368 | 1057 | SMART | LRR_typ_2 | 492 | 516 | IPR003591 | - | |
Tsu02g04368 | 1057 | SMART | LRR_typ_2 | 128 | 151 | IPR003591 | - | |
Tsu02g04368 | 1057 | SUPERFAMILY | L domain-like | 445 | 645 | - | - | |
Tsu02g04368 | 1057 | PANTHER | PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA | 460 | 516 | - | - | |
Tsu02g04368 | 1057 | PANTHER | PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA | 560 | 617 | - | - | |
Tsu02g04368 | 1057 | PANTHER | PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA | 177 | 281 | - | - | |
Tsu02g04368 | 1057 | SUPERFAMILY | Protein kinase-like (PK-like) | 757 | 1047 | IPR011009 | - | |
Tsu02g04368 | 1057 | Gene3D | Transferase(Phosphotransferase) domain 1 | 852 | 1053 | - | - | |
Tsu02g04368 | 1057 | Pfam | Leucine rich repeat | 322 | 381 | IPR001611 | GO:0005515 | |
Tsu02g04368 | 1057 | Pfam | Leucine rich repeat | 446 | 505 | IPR001611 | GO:0005515 | |
Tsu02g04368 | 1057 | Pfam | Leucine rich repeat | 106 | 164 | IPR001611 | GO:0005515 | |
Tsu02g04368 | 1057 | Gene3D | Ribonuclease Inhibitor | 33 | 303 | IPR032675 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Tsu02g04368 | Tsu-Chr2 | 52339797 | 52343906 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Tsu02g04368 | 65 | 1053 | Receptor kinase-like Gene Family | AT1G55610 | 34.455 | 9.90e-165 | 514 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-Xb-1 | Tsu02g04368 | Pkinase | 1.3e-44 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tsu02g04368 | - | - | mtr:MTR_2g078810 | 1808.5 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Tsu02g04368 | 02 | 52339797 | 52343906 | Tsu02g04368 | 02 | 52339797 | 52343906 | ECH |