Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g04364 ATGGCTGCTAGAGACATTCTTCATAAGATGAAGGAAAAAGTTGGGTTTGGTTTATCAGACCCAGATTCAGGTAAAGGAAAGAGCAAGATGTCGAAACACATAACTCATGGATTTCACTTGGTAAAGGGAAGATCATATCATGAAATGGAGGATTATCTTGTTGCAAGATTTAAGCAAATCGATAATCATGAATTAGGCTTGTTTGCAATATTTGATGGCCATGCTGGTCACAATGTACCTAACTACTTGCAGTCTCATTTGTTTGATAATATCTTAAAAGAGCCTGACTTCTGGAAAGAACCTGTAAATGCTGTCAAGCAAGCGTATAGTATAACCGATTCTAGTATTTTAGAGAAGTCAGGTGAATTGGGTAGAGGGGGTTCAACCGCAGTTACTGCAATATTGATTGATGGTCAGAAGTTAATAGTAGCCAATATCGGAGATTCTCGGGCTGTCTTATCAAAGAAAGGTGTGGCCAAACAACTGTCGGTGGATCATGAACCAACCACAGAACATGAGGATATAAAAAATAGAGGTGGTTTTGTATCAAGATTCCCAGGTATGATATATTTTATAGGGTTTATAATTTTGCTTTATCTTATTAGTACGAGTGAATAG 618 0.3738 MAARDILHKMKEKVGFGLSDPDSGKGKSKMSKHITHGFHLVKGRSYHEMEDYLVARFKQIDNHELGLFAIFDGHAGHNVPNYLQSHLFDNILKEPDFWKEPVNAVKQAYSITDSSILEKSGELGRGGSTAVTAILIDGQKLIVANIGDSRAVLSKKGVAKQLSVDHEPTTEHEDIKNRGGFVSRFPGMIYFIGFIILLYLISTSE 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g04364 205 Gene3D - 15 193 IPR036457 -
Tsu02g04364 205 SUPERFAMILY PP2C-like 31 184 IPR036457 -
Tsu02g04364 205 Pfam Protein phosphatase 2C 47 184 IPR001932 -
Tsu02g04364 205 PANTHER PROTEIN PHOSPHATASE 2C 39-RELATED 1 187 - -
Tsu02g04364 205 ProSiteProfiles PPM-type phosphatase domain profile. 35 205 IPR001932 -
Tsu02g04364 205 ProSitePatterns PPM-type phosphatase domain signature. 67 75 IPR000222 GO:0043169
Tsu02g04364 205 CDD PP2Cc 36 189 IPR001932 -
Tsu02g04364 205 PANTHER PROTEIN PHOSPHATASE 2C 1 187 IPR015655 GO:0004722|GO:0006470
Tsu02g04364 205 SMART PP2C_4 33 198 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g04364 Tsu-Chr2 52303655 52307702 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g04364 1 187 PP2C-type Phosphatase Gene Family AT3G15260 68.394 3.14e-96 280
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g04364 K17506 - gmx:100500617 327.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g04364 02 52303655 52307702 Tsu02g04364 02 52303655 52307702 ECH