Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g04362 atggTGGGCTCAGGAGCAGCATCAGATAGGAGCAAAGAAGCTGTTGGTATGATGGCCCTTCATGAGGCCCTCAGAACCGTCTGTCTTAACTCAGACTGGACTTACTCTGTCTTCTGGACTATTCGTCCTCGCCCAAGAGTTAGAGGTGGTAATGGCTGTAAGGTTGGAGATGATAATGGAAGCTTGATGTTGATGTGGGAAGATGGATTTTGCCGTGGAGATCATATTGATGGTGGTGGAGAAGATCCTGTTAGAAAAGCTTTCAGCAAAATGTCCATTCAGTTGTATAATTATGGAGAAGGGTTGATGGGGAAAGTTGCATCTGATAAGTGTCACAAGTGGGTCTTTAAAGAACCAACAGAATGTGAACCTAATATCTCTAACTACTGGCAAAGTTCCTTTGATGCTCTTCCTCCTGAATGGACAGACCAATTTGAGTCAGGCATTCAGACCATAGCTGTAATTCAAGCTGGACATGGTCTTCTTCAACTTGGTTCTTGTAAGATTATTCCTGAAGATCTTCATTTTGTCCTAAGAATGAGACACACATTTGAATCATTAGGTTACCAATCTGGTTTCTACCTCTCACAACTCTTCTCATCAACAAGAAACACTTCATCATCAACTTCACTTCCATCAAAACCATCTTCAACCATTCCAATTAGGTCACCTCCACCACTCTTCAACTGGGGTCAAAGACCATTAACTTCTCCTTCATCAATGCTATCCTCACCCAATTTTCAACAACATGCAGCTAGACTTGGTTTTCCACAAACCAAAGATGAAACACACATGTTCCTCATGCCTCATGCATCATCACATGAAACTCCAAGAATGGAAGACATGATGGGAGGAGGAGAACAACATCATGAAAATGACATTAAATGGCCTAATGGTTTGTCTTTCTTTAATGCTTTAACCGGTCGAGCCGATGATGCTAAGCTTTTGTTTAATCCAGATGGTTTAGGTGGAAAACAAGGTGATCATGATCATGATAAtgatcaacaacatcatcacacTCTTAATCAAAATCCTAATTTAGATGGTTCAAATCCAAATGAGTTCTTGAGCTTGGATAGTATTAGTCATAATGAAGGTGCAAGGAAAATGGATAAGTTTAAGAGGAGTTTCACTTTACCTAATAGAGTtgcttcatcatcttcatctacTTCAATggaacatcatcaacaacaaggTGTGGAGTATAGGAATTCAGAAGGTGGTATGTATTCAGATGTTATGGAGACTTTTTTGGAGTGA 1260 0.3802 MVGSGAASDRSKEAVGMMALHEALRTVCLNSDWTYSVFWTIRPRPRVRGGNGCKVGDDNGSLMLMWEDGFCRGDHIDGGGEDPVRKAFSKMSIQLYNYGEGLMGKVASDKCHKWVFKEPTECEPNISNYWQSSFDALPPEWTDQFESGIQTIAVIQAGHGLLQLGSCKIIPEDLHFVLRMRHTFESLGYQSGFYLSQLFSSTRNTSSSTSLPSKPSSTIPIRSPPPLFNWGQRPLTSPSSMLSSPNFQQHAARLGFPQTKDETHMFLMPHASSHETPRMEDMMGGGEQHHENDIKWPNGLSFFNALTGRADDAKLLFNPDGLGGKQGDHDHDNDQQHHHTLNQNPNLDGSNPNEFLSLDSISHNEGARKMDKFKRSFTLPNRVASSSSSTSMEHHQQQGVEYRNSEGGMYSDVMETFLE 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g04362 419 MobiDBLite consensus disorder prediction 204 227 - -
Tsu02g04362 419 MobiDBLite consensus disorder prediction 324 338 - -
Tsu02g04362 419 PANTHER GB|AAF34833.1 1 419 IPR044170 -
Tsu02g04362 419 PANTHER GB|AAF34833.1 1 419 - -
Tsu02g04362 419 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 86 184 IPR025610 -
Tsu02g04362 419 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 20 74 IPR025610 -
Tsu02g04362 419 MobiDBLite consensus disorder prediction 339 358 - -
Tsu02g04362 419 MobiDBLite consensus disorder prediction 381 402 - -
Tsu02g04362 419 MobiDBLite consensus disorder prediction 317 358 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g04362 Tsu-Chr2 52272462 52275387 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g04362 21 225 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31280 32.057 8.14e-22 96.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g04362 - - gmx:100814723 657.907
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g04362 02 52272462 52275387 Tsu02g04362 02 52272462 52275387 ECH