Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g04360 ATGGAGGATCTAGCAGGTCTAGTTGAGGCAACAGGATCGAGATTTACTTCGTTGGAGCTTATTGGGCAGGGATCATTTGGTGATGTATATAAAGGGTTTGACAGGGAGCTCAACAAAGTAGTGGCCATCAAAGTGATTGATTTGGAAGAATCAGAGGATGACATTGACGATATTCAGAAGGAAATTTCTGTTCTGTCACAATGTCGATGTCCATACATTACCGAGTATTATGGTTCTTTTCTCAATCAGACTAAACTATGGATAATAATGGAATATATGGCGGGTGGCTCTGTTGCTGATCTACTCCAATCAGGCACTCCCCTAGACGAAATGTCAATTGCTTATATTCTTCGTGACTTGTTGCATGCTGTCGATTACCTACATAGTGAAGGCAAAATCCATAGAGACATTAAAGCTGCAAACATTTTATTGTCCGAGAATGGTGATGTAAAGGTTGCAGATTTTGGTGTTTCTGCACAGTTGACAAGGACTATATCAAGGAGAAAGACATTTGTAGGCACACCATTCTGGATGGCGCCTGAGGTTATTCAGAACTCAGATGGATATAACGAGAAGGCAGATATCTGGTCTCTGGGGATCACTGCAATTGAGATGGCAAAGGGGGAGCCTCCACTTGCTGATCTTCATCCCATGAGGGTGCTTTTCATCATACCCCGAGAAAATCCTCCACAGCTAGACGAGCATTTTTCTCGACCCATGAAAGAATTTGTTTCATCATGTTTGAAGAAGGTTCCGGCTGAGAGGCCAAGTGCTAAGGAACTTCTCAAAGACCGTTTTATTCGGAATGCTAGGAAGAGTCCAAAGCTTTTGGAAAGATTAAGTCGGGAGCGTCCAAAATATCAAGTTAAGGAAGACTTGGAGACAGCTAGAAATGTCCAAAGAGGGATTGGTGAGGGATCGGATACTATGAAGGTGGCAAGAGATTCCAAAGTTGACGAAATTAATCGACTCAGTCGTCAGGGCAAGACCTTGAAAGGTTCTGAATGGGACTTTAGCATTGGTGAATCAGAGGGTACTGGAACCTTTCGAAGTGTTTCACGGCCACCTCAGTCTAGAGATAAGAAAACTGAAGGTTCATATAATCAGCTTACCCAAAGAAAAGCTCCAGACGTTGGCTATCAAGGGGGATTTCCCACTAGAAGTTCATTCAATCAAGCACTTGAAAAAGATCTTAGAGCTCCTTACCAACATGAGCAGCTGGATAATCAGCTTGAAGATGATGAGTTATCTGGGAATGGATCAGGAACCGTTGTTATACGCTCTCCCAAAGGAATATCAAGGACATCTGCGTTTCGTGAGCATATCTCCCACTCCCAGGATGATGATTTGTCTGAGAATGGATCAGGAACTGTTGTTATTCGATCTCCAAAAGGATCAAAGCCATCTATGTTTCGTGAGAGCTCCCAGTCCAGCAGCAGCTATGCTTCTTTTGAAGATACTTCCACGAGTGGAACTGTTGTTTTACGTGGTCAACATGATGATTCTGATTCTCCACGGACTCCAAGGTCCCGACTTGGAATTCATGACAGAAATTCAAATGTTTCACTTGAAGATAGTGCTGCAAACCTAGCCGAGGCAAAGGCTGCTATCCAAGGAGGGAAAAAAAACGTGAATGCTCGGGAAAGACATTCCCGTGGAAAAATCAGTAGCGATAATATACAGGAAAGCAAAAGAGATCAAATGACTAGCAGCACTGATTCTTCCAGATCATATCGTGAATACATTGATGCACAAAGGGGCATGGTACGATCAAATTATGCcggtgatgatgaagaaagtgcTAGAATAATATCATCGTCGGCGCCATTATCAGTTTTGCTTATTCCTTCATTAAAAGAGGCCATTGCTGATGATCCAGAAGGGCAAATTGTGCGGGCAGTTATCGATTCTTTAATAAACATGGAGGGTACAAAGCCTAGATCCTCTGATGTTCTTGTCAAAAAATTGCTTCAAAGATTAGCAAGTTCAAAGGAAGAATCATTGAAAGACCTGCAAGGACTGGCAAGCCAACTATTCAACAAAGCCAAGTCAACCGAAGAAATTCAAAATGCGGAAGCTGATAACCGAAGGAAACAACATAACAAGGAACCTCATCCTAATAGCAACTTAAGCCCTCTTGCAAGATTTCTTCTATCAAGATGGCAAGGCCAAACCTCACGGGATCTAAACCAATCTTGA 2199 0.4216 MEDLAGLVEATGSRFTSLELIGQGSFGDVYKGFDRELNKVVAIKVIDLEESEDDIDDIQKEISVLSQCRCPYITEYYGSFLNQTKLWIIMEYMAGGSVADLLQSGTPLDEMSIAYILRDLLHAVDYLHSEGKIHRDIKAANILLSENGDVKVADFGVSAQLTRTISRRKTFVGTPFWMAPEVIQNSDGYNEKADIWSLGITAIEMAKGEPPLADLHPMRVLFIIPRENPPQLDEHFSRPMKEFVSSCLKKVPAERPSAKELLKDRFIRNARKSPKLLERLSRERPKYQVKEDLETARNVQRGIGEGSDTMKVARDSKVDEINRLSRQGKTLKGSEWDFSIGESEGTGTFRSVSRPPQSRDKKTEGSYNQLTQRKAPDVGYQGGFPTRSSFNQALEKDLRAPYQHEQLDNQLEDDELSGNGSGTVVIRSPKGISRTSAFREHISHSQDDDLSENGSGTVVIRSPKGSKPSMFRESSQSSSSYASFEDTSTSGTVVLRGQHDDSDSPRTPRSRLGIHDRNSNVSLEDSAANLAEAKAAIQGGKKNVNARERHSRGKISSDNIQESKRDQMTSSTDSSRSYREYIDAQRGMVRSNYAGDDEESARIISSSAPLSVLLIPSLKEAIADDPEGQIVRAVIDSLINMEGTKPRSSDVLVKKLLQRLASSKEESLKDLQGLASQLFNKAKSTEEIQNAEADNRRKQHNKEPHPNSNLSPLARFLLSRWQGQTSRDLNQS 732
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g04360 732 MobiDBLite consensus disorder prediction 687 715 - -
Tsu02g04360 732 MobiDBLite consensus disorder prediction 562 578 - -
Tsu02g04360 732 Coils Coil 681 703 - -
Tsu02g04360 732 MobiDBLite consensus disorder prediction 539 578 - -
Tsu02g04360 732 PANTHER STERILE20-LIKE KINASE, ISOFORM B-RELATED 446 730 - -
Tsu02g04360 732 Pfam Protein kinase domain 16 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g04360 732 MobiDBLite consensus disorder prediction 335 388 - -
Tsu02g04360 732 SMART serkin_6 15 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g04360 732 MobiDBLite consensus disorder prediction 543 561 - -
Tsu02g04360 732 MobiDBLite consensus disorder prediction 413 430 - -
Tsu02g04360 732 MobiDBLite consensus disorder prediction 411 521 - -
Tsu02g04360 732 Gene3D Transferase(Phosphotransferase) domain 1 12 302 - -
Tsu02g04360 732 Coils Coil 48 68 - -
Tsu02g04360 732 MobiDBLite consensus disorder prediction 687 704 - -
Tsu02g04360 732 SUPERFAMILY Protein kinase-like (PK-like) 13 268 IPR011009 -
Tsu02g04360 732 ProSiteProfiles Protein kinase domain profile. 15 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g04360 732 MobiDBLite consensus disorder prediction 499 513 - -
Tsu02g04360 732 MobiDBLite consensus disorder prediction 449 497 - -
Tsu02g04360 732 CDD STKc_MST3_like 13 288 - -
Tsu02g04360 732 PANTHER STERILE20-LIKE KINASE, ISOFORM B-RELATED 1 445 - -
Tsu02g04360 732 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 1 445 - -
Tsu02g04360 732 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 446 730 - -
Tsu02g04360 732 ProSitePatterns Protein kinases ATP-binding region signature. 21 44 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g04360 Tsu-Chr2 52214834 52227278 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g04360 1 729 MAP Kinase Kinase Kinase Kinase AT3G15220 60.739 0.0 815
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-YSK Tsu02g04360 Pkinase 3.2e-69 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g04360 K08838 - gmx:100815042 1068.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g04360 02 52214834 52227278 Tsu02g04360 02 52214834 52227278 ECH